Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Scn5aQ9JJV9 Iqck-206ENSMUST00000208658 2891 ntBASIC17.95■□□□□ 0.46
Scn5aQ9JJV9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.95■□□□□ 0.46
Scn5aQ9JJV9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn5aQ9JJV9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn5aQ9JJV9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn5aQ9JJV9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn5aQ9JJV9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn5aQ9JJV9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn5aQ9JJV9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn5aQ9JJV9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.94■□□□□ 0.46
Scn5aQ9JJV9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.94■□□□□ 0.46
Scn5aQ9JJV9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn5aQ9JJV9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn5aQ9JJV9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn5aQ9JJV9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn5aQ9JJV9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn5aQ9JJV9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Scn5aQ9JJV9 Gm15794-201ENSMUST00000120182 631 ntBASIC17.94■□□□□ 0.46
Scn5aQ9JJV9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.94■□□□□ 0.46
Scn5aQ9JJV9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn5aQ9JJV9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn5aQ9JJV9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn5aQ9JJV9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn5aQ9JJV9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scn5aQ9JJV9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn5aQ9JJV9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn5aQ9JJV9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn5aQ9JJV9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn5aQ9JJV9 Gm45328-201ENSMUST00000210942 917 ntBASIC17.93■□□□□ 0.46
Scn5aQ9JJV9 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.93■□□□□ 0.46
Scn5aQ9JJV9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn5aQ9JJV9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.93■□□□□ 0.46
Scn5aQ9JJV9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn5aQ9JJV9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Scn5aQ9JJV9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Scn5aQ9JJV9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Scn5aQ9JJV9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn5aQ9JJV9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn5aQ9JJV9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn5aQ9JJV9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.92■□□□□ 0.46
Scn5aQ9JJV9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn5aQ9JJV9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn5aQ9JJV9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn5aQ9JJV9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.92■□□□□ 0.46
Scn5aQ9JJV9 Gm27459-201ENSMUST00000184860 107 ntBASIC17.92■□□□□ 0.46
Scn5aQ9JJV9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Scn5aQ9JJV9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Scn5aQ9JJV9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn5aQ9JJV9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn5aQ9JJV9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn5aQ9JJV9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn5aQ9JJV9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn5aQ9JJV9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn5aQ9JJV9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Scn5aQ9JJV9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn5aQ9JJV9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn5aQ9JJV9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn5aQ9JJV9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scn5aQ9JJV9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn5aQ9JJV9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn5aQ9JJV9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn5aQ9JJV9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Scn5aQ9JJV9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn5aQ9JJV9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn5aQ9JJV9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn5aQ9JJV9 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.91■□□□□ 0.46
Scn5aQ9JJV9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn5aQ9JJV9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn5aQ9JJV9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scn5aQ9JJV9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn5aQ9JJV9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scn5aQ9JJV9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Scn5aQ9JJV9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.9■□□□□ 0.46
Scn5aQ9JJV9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.9■□□□□ 0.46
Scn5aQ9JJV9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn5aQ9JJV9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn5aQ9JJV9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
Scn5aQ9JJV9 Gm11336-201ENSMUST00000118168 334 ntBASIC17.89■□□□□ 0.46
Scn5aQ9JJV9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Scn5aQ9JJV9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.89■□□□□ 0.46
Scn5aQ9JJV9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.46
Scn5aQ9JJV9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.46
Scn5aQ9JJV9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.46
Scn5aQ9JJV9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
Scn5aQ9JJV9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn5aQ9JJV9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.89■□□□□ 0.45
Scn5aQ9JJV9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Scn5aQ9JJV9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn5aQ9JJV9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Scn5aQ9JJV9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn5aQ9JJV9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn5aQ9JJV9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Scn5aQ9JJV9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Scn5aQ9JJV9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn5aQ9JJV9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Scn5aQ9JJV9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Scn5aQ9JJV9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn5aQ9JJV9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Scn5aQ9JJV9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms