Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
CPNE4Q96A23 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE4Q96A23 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE4Q96A23 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE4Q96A23 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE4Q96A23 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE4Q96A23 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
CPNE4Q96A23 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE4Q96A23 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE4Q96A23 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE4Q96A23 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18■□□□□ 0.47
CPNE4Q96A23 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPNE4Q96A23 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE4Q96A23 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE4Q96A23 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE4Q96A23 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE4Q96A23 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE4Q96A23 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPNE4Q96A23 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE4Q96A23 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18■□□□□ 0.47
CPNE4Q96A23 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE4Q96A23 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE4Q96A23 HLA-G-202ENST00000376815 851 ntBASIC18■□□□□ 0.47
CPNE4Q96A23 HLA-G-203ENST00000376818 1127 ntBASIC18■□□□□ 0.47
CPNE4Q96A23 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPNE4Q96A23 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE4Q96A23 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CPNE4Q96A23 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18■□□□□ 0.47
CPNE4Q96A23 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18■□□□□ 0.47
CPNE4Q96A23 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18■□□□□ 0.47
CPNE4Q96A23 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18■□□□□ 0.47
CPNE4Q96A23 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18■□□□□ 0.47
CPNE4Q96A23 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPNE4Q96A23 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE4Q96A23 DPP3P2-201ENST00000416030 1696 ntBASIC17.99■□□□□ 0.47
CPNE4Q96A23 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.99■□□□□ 0.47
CPNE4Q96A23 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE4Q96A23 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.99■□□□□ 0.47
CPNE4Q96A23 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CPNE4Q96A23 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.99■□□□□ 0.47
CPNE4Q96A23 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.99■□□□□ 0.47
CPNE4Q96A23 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.99■□□□□ 0.47
CPNE4Q96A23 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE4Q96A23 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.99■□□□□ 0.47
CPNE4Q96A23 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
CPNE4Q96A23 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE4Q96A23 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE4Q96A23 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CPNE4Q96A23 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.99■□□□□ 0.47
CPNE4Q96A23 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE4Q96A23 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE4Q96A23 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE4Q96A23 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE4Q96A23 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE4Q96A23 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE4Q96A23 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE4Q96A23 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE4Q96A23 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.98■□□□□ 0.47
CPNE4Q96A23 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE4Q96A23 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE4Q96A23 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.98■□□□□ 0.47
CPNE4Q96A23 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE4Q96A23 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.98■□□□□ 0.47
CPNE4Q96A23 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.98■□□□□ 0.47
CPNE4Q96A23 AP003097.1-201ENST00000530657 1135 ntBASIC17.98■□□□□ 0.47
CPNE4Q96A23 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.98■□□□□ 0.47
CPNE4Q96A23 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE4Q96A23 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE4Q96A23 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CPNE4Q96A23 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.98■□□□□ 0.47
CPNE4Q96A23 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE4Q96A23 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.98■□□□□ 0.47
CPNE4Q96A23 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE4Q96A23 KRT8P20-201ENST00000423953 1409 ntBASIC17.98■□□□□ 0.47
CPNE4Q96A23 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CPNE4Q96A23 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE4Q96A23 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE4Q96A23 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CPNE4Q96A23 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CPNE4Q96A23 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.97■□□□□ 0.47
CPNE4Q96A23 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE4Q96A23 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE4Q96A23 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE4Q96A23 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CPNE4Q96A23 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.97■□□□□ 0.47
CPNE4Q96A23 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CPNE4Q96A23 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
CPNE4Q96A23 AL031963.3-201ENST00000606441 850 ntBASIC17.97■□□□□ 0.47
CPNE4Q96A23 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CPNE4Q96A23 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CPNE4Q96A23 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.97■□□□□ 0.47
CPNE4Q96A23 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE4Q96A23 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE4Q96A23 PTBP1P-201ENST00000554374 1601 ntBASIC17.97■□□□□ 0.47
CPNE4Q96A23 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.97■□□□□ 0.47
CPNE4Q96A23 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE4Q96A23 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE4Q96A23 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE4Q96A23 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE4Q96A23 AC020907.5-201ENST00000624372 1936 ntBASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms