Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trnt1Q8K1J6 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trnt1Q8K1J6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.83■□□□□ 0.28
Trnt1Q8K1J6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trnt1Q8K1J6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trnt1Q8K1J6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trnt1Q8K1J6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trnt1Q8K1J6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trnt1Q8K1J6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trnt1Q8K1J6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trnt1Q8K1J6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trnt1Q8K1J6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trnt1Q8K1J6 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trnt1Q8K1J6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trnt1Q8K1J6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.82■□□□□ 0.28
Trnt1Q8K1J6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.82■□□□□ 0.28
Trnt1Q8K1J6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trnt1Q8K1J6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trnt1Q8K1J6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trnt1Q8K1J6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trnt1Q8K1J6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trnt1Q8K1J6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trnt1Q8K1J6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trnt1Q8K1J6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trnt1Q8K1J6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trnt1Q8K1J6 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.82■□□□□ 0.28
Trnt1Q8K1J6 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.81■□□□□ 0.28
Trnt1Q8K1J6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trnt1Q8K1J6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trnt1Q8K1J6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trnt1Q8K1J6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trnt1Q8K1J6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trnt1Q8K1J6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trnt1Q8K1J6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trnt1Q8K1J6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trnt1Q8K1J6 Gm10698-201ENSMUST00000182663 604 ntBASIC16.81■□□□□ 0.28
Trnt1Q8K1J6 Gm4974-201ENSMUST00000209974 875 ntBASIC16.81■□□□□ 0.28
Trnt1Q8K1J6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Trnt1Q8K1J6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Trnt1Q8K1J6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trnt1Q8K1J6 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.81■□□□□ 0.28
Trnt1Q8K1J6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trnt1Q8K1J6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trnt1Q8K1J6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trnt1Q8K1J6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trnt1Q8K1J6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trnt1Q8K1J6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trnt1Q8K1J6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trnt1Q8K1J6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trnt1Q8K1J6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trnt1Q8K1J6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.8■□□□□ 0.28
Trnt1Q8K1J6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trnt1Q8K1J6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.8■□□□□ 0.28
Trnt1Q8K1J6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trnt1Q8K1J6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trnt1Q8K1J6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trnt1Q8K1J6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trnt1Q8K1J6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.8■□□□□ 0.28
Trnt1Q8K1J6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 Gm10517-202ENSMUST00000192970 758 ntBASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trnt1Q8K1J6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trnt1Q8K1J6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trnt1Q8K1J6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trnt1Q8K1J6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trnt1Q8K1J6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trnt1Q8K1J6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trnt1Q8K1J6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Trnt1Q8K1J6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trnt1Q8K1J6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.78■□□□□ 0.28
Trnt1Q8K1J6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trnt1Q8K1J6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Trnt1Q8K1J6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trnt1Q8K1J6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Trnt1Q8K1J6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trnt1Q8K1J6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.78■□□□□ 0.28
Trnt1Q8K1J6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trnt1Q8K1J6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Trnt1Q8K1J6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trnt1Q8K1J6 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms