Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Traf4Q61382 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Traf4Q61382 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Traf4Q61382 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Traf4Q61382 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Traf4Q61382 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Traf4Q61382 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Traf4Q61382 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Traf4Q61382 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Traf4Q61382 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Traf4Q61382 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Traf4Q61382 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Traf4Q61382 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Traf4Q61382 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Traf4Q61382 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Traf4Q61382 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Traf4Q61382 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Traf4Q61382 Zfp783-201ENSMUST00000095946 670 ntBASIC15.38■□□□□ 0.05
Traf4Q61382 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Traf4Q61382 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Traf4Q61382 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Traf4Q61382 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Traf4Q61382 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Traf4Q61382 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Traf4Q61382 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Traf4Q61382 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Traf4Q61382 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Traf4Q61382 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Traf4Q61382 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Traf4Q61382 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.37■□□□□ 0.05
Traf4Q61382 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Traf4Q61382 Gm13836-201ENSMUST00000121159 501 ntBASIC15.37■□□□□ 0.05
Traf4Q61382 Gm37055-201ENSMUST00000191866 133 ntBASIC15.37■□□□□ 0.05
Traf4Q61382 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Traf4Q61382 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Traf4Q61382 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Traf4Q61382 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Traf4Q61382 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Traf4Q61382 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Traf4Q61382 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Traf4Q61382 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Traf4Q61382 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Traf4Q61382 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Traf4Q61382 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Traf4Q61382 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Traf4Q61382 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Traf4Q61382 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Traf4Q61382 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Traf4Q61382 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Traf4Q61382 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Traf4Q61382 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Traf4Q61382 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Traf4Q61382 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.36■□□□□ 0.05
Traf4Q61382 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Traf4Q61382 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Traf4Q61382 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.36■□□□□ 0.05
Traf4Q61382 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Traf4Q61382 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.36■□□□□ 0.05
Traf4Q61382 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.36■□□□□ 0.05
Traf4Q61382 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Traf4Q61382 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Traf4Q61382 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.36■□□□□ 0.05
Traf4Q61382 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Traf4Q61382 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.36■□□□□ 0.05
Traf4Q61382 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Traf4Q61382 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Traf4Q61382 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Traf4Q61382 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Traf4Q61382 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Traf4Q61382 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Traf4Q61382 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Traf4Q61382 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Traf4Q61382 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Traf4Q61382 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.35■□□□□ 0.05
Traf4Q61382 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.35■□□□□ 0.05
Traf4Q61382 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.35■□□□□ 0.05
Traf4Q61382 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Traf4Q61382 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Traf4Q61382 Mtag2-201ENSMUST00000058665 714 ntBASIC15.35■□□□□ 0.05
Traf4Q61382 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Traf4Q61382 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Traf4Q61382 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Traf4Q61382 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Traf4Q61382 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Traf4Q61382 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Traf4Q61382 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Traf4Q61382 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Traf4Q61382 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Traf4Q61382 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Traf4Q61382 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Traf4Q61382 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.35■□□□□ 0.05
Traf4Q61382 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Traf4Q61382 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Traf4Q61382 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Traf4Q61382 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Traf4Q61382 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Traf4Q61382 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Traf4Q61382 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Traf4Q61382 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Traf4Q61382 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms