Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim63Q38HM4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim63Q38HM4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim63Q38HM4 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim63Q38HM4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim63Q38HM4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim63Q38HM4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim63Q38HM4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim63Q38HM4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim63Q38HM4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim63Q38HM4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim63Q38HM4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim63Q38HM4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim63Q38HM4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim63Q38HM4 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Trim63Q38HM4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim63Q38HM4 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim63Q38HM4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim63Q38HM4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim63Q38HM4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim63Q38HM4 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim63Q38HM4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim63Q38HM4 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Trim63Q38HM4 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim63Q38HM4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim63Q38HM4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim63Q38HM4 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.42□□□□□ -0.1
Trim63Q38HM4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim63Q38HM4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim63Q38HM4 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim63Q38HM4 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim63Q38HM4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim63Q38HM4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim63Q38HM4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim63Q38HM4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim63Q38HM4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim63Q38HM4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim63Q38HM4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim63Q38HM4 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim63Q38HM4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim63Q38HM4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim63Q38HM4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim63Q38HM4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim63Q38HM4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim63Q38HM4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim63Q38HM4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim63Q38HM4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim63Q38HM4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim63Q38HM4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim63Q38HM4 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim63Q38HM4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim63Q38HM4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim63Q38HM4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim63Q38HM4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC14.41□□□□□ -0.1
Trim63Q38HM4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
Trim63Q38HM4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim63Q38HM4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Trim63Q38HM4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim63Q38HM4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim63Q38HM4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim63Q38HM4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim63Q38HM4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim63Q38HM4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim63Q38HM4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim63Q38HM4 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim63Q38HM4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim63Q38HM4 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim63Q38HM4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim63Q38HM4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim63Q38HM4 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim63Q38HM4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim63Q38HM4 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Trim63Q38HM4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim63Q38HM4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim63Q38HM4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim63Q38HM4 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim63Q38HM4 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim63Q38HM4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC14.4□□□□□ -0.1
Trim63Q38HM4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim63Q38HM4 Gm7143-201ENSMUST00000222811 859 ntBASIC14.4□□□□□ -0.1
Trim63Q38HM4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim63Q38HM4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim63Q38HM4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim63Q38HM4 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim63Q38HM4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim63Q38HM4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim63Q38HM4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim63Q38HM4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trim63Q38HM4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim63Q38HM4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim63Q38HM4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim63Q38HM4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim63Q38HM4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim63Q38HM4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim63Q38HM4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim63Q38HM4 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim63Q38HM4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim63Q38HM4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trim63Q38HM4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim63Q38HM4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms