Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CROCCP5-201ENST00000436658 830 ntBASIC17.56■□□□□ 0.4
HIST1H3AP68431 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HIST1H3AP68431 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.56■□□□□ 0.4
HIST1H3AP68431 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST1H3AP68431 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HIST1H3AP68431 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST1H3AP68431 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HIST1H3AP68431 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST1H3AP68431 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST1H3AP68431 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST1H3AP68431 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST1H3AP68431 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HIST1H3AP68431 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H3AP68431 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.55■□□□□ 0.4
HIST1H3AP68431 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H3AP68431 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H3AP68431 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
HIST1H3AP68431 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H3AP68431 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HIST1H3AP68431 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.55■□□□□ 0.4
HIST1H3AP68431 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H3AP68431 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H3AP68431 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H3AP68431 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H3AP68431 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H3AP68431 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.55■□□□□ 0.4
HIST1H3AP68431 AF201337.1-201ENST00000520239 748 ntBASIC17.55■□□□□ 0.4
HIST1H3AP68431 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.55■□□□□ 0.4
HIST1H3AP68431 C2orf69P4-201ENST00000565394 541 ntBASIC17.55■□□□□ 0.4
HIST1H3AP68431 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.55■□□□□ 0.4
HIST1H3AP68431 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
HIST1H3AP68431 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H3AP68431 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST1H3AP68431 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H3AP68431 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HIST1H3AP68431 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.54■□□□□ 0.4
HIST1H3AP68431 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H3AP68431 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H3AP68431 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.54■□□□□ 0.4
HIST1H3AP68431 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
HIST1H3AP68431 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.54■□□□□ 0.4
HIST1H3AP68431 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H3AP68431 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H3AP68431 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.54■□□□□ 0.4
HIST1H3AP68431 AL031963.3-201ENST00000606441 850 ntBASIC17.54■□□□□ 0.4
HIST1H3AP68431 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.54■□□□□ 0.4
HIST1H3AP68431 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.54■□□□□ 0.4
HIST1H3AP68431 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H3AP68431 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H3AP68431 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.54■□□□□ 0.4
HIST1H3AP68431 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST1H3AP68431 AL691432.2-201ENST00000607222 2038 ntBASIC17.54■□□□□ 0.4
HIST1H3AP68431 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H3AP68431 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H3AP68431 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H3AP68431 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H3AP68431 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.53■□□□□ 0.4
HIST1H3AP68431 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.53■□□□□ 0.4
HIST1H3AP68431 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H3AP68431 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.53■□□□□ 0.4
HIST1H3AP68431 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H3AP68431 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H3AP68431 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H3AP68431 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.53■□□□□ 0.4
HIST1H3AP68431 MIR663A-201ENST00000385250 93 ntBASIC17.53■□□□□ 0.4
HIST1H3AP68431 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.53■□□□□ 0.4
HIST1H3AP68431 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.53■□□□□ 0.4
HIST1H3AP68431 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.53■□□□□ 0.4
HIST1H3AP68431 AC105036.2-201ENST00000569468 176 ntBASIC17.53■□□□□ 0.4
HIST1H3AP68431 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H3AP68431 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H3AP68431 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H3AP68431 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.53■□□□□ 0.4
HIST1H3AP68431 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H3AP68431 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H3AP68431 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.53■□□□□ 0.4
HIST1H3AP68431 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HIST1H3AP68431 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST1H3AP68431 MKRN4P-201ENST00000444706 1521 ntBASIC17.52■□□□□ 0.4
HIST1H3AP68431 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST1H3AP68431 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HIST1H3AP68431 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.52■□□□□ 0.4
HIST1H3AP68431 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST1H3AP68431 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.52■□□□□ 0.4
HIST1H3AP68431 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.52■□□□□ 0.4
HIST1H3AP68431 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST1H3AP68431 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.52■□□□□ 0.4
HIST1H3AP68431 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.52■□□□□ 0.4
HIST1H3AP68431 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.52■□□□□ 0.4
HIST1H3AP68431 AC023632.3-201ENST00000521633 145 ntBASIC17.52■□□□□ 0.4
HIST1H3AP68431 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.52■□□□□ 0.4
HIST1H3AP68431 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.52■□□□□ 0.4
HIST1H3AP68431 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST1H3AP68431 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HIST1H3AP68431 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST1H3AP68431 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
HIST1H3AP68431 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HIST1H3AP68431 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HIST1H3AP68431 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
HIST1H3AP68431 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms