Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a1P61620 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a1P61620 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a1P61620 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a1P61620 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sec61a1P61620 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a1P61620 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a1P61620 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a1P61620 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a1P61620 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a1P61620 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sec61a1P61620 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a1P61620 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a1P61620 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.31■□□□□ 0.04
Sec61a1P61620 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.31■□□□□ 0.04
Sec61a1P61620 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.31■□□□□ 0.04
Sec61a1P61620 Rab3c-203ENSMUST00000224180 967 ntBASIC15.31■□□□□ 0.04
Sec61a1P61620 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a1P61620 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.31■□□□□ 0.04
Sec61a1P61620 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a1P61620 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a1P61620 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Sec61a1P61620 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a1P61620 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a1P61620 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.31■□□□□ 0.04
Sec61a1P61620 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a1P61620 Haglr-201ENSMUST00000100000 2085 ntBASIC15.31■□□□□ 0.04
Sec61a1P61620 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sec61a1P61620 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Sec61a1P61620 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sec61a1P61620 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a1P61620 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a1P61620 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a1P61620 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a1P61620 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.3■□□□□ 0.04
Sec61a1P61620 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Sec61a1P61620 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a1P61620 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a1P61620 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a1P61620 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.3■□□□□ 0.04
Sec61a1P61620 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sec61a1P61620 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a1P61620 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a1P61620 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sec61a1P61620 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a1P61620 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Sec61a1P61620 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a1P61620 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.3■□□□□ 0.04
Sec61a1P61620 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sec61a1P61620 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a1P61620 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a1P61620 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.29■□□□□ 0.04
Sec61a1P61620 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Sec61a1P61620 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a1P61620 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Sec61a1P61620 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.29■□□□□ 0.04
Sec61a1P61620 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a1P61620 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a1P61620 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a1P61620 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sec61a1P61620 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a1P61620 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a1P61620 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a1P61620 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a1P61620 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a1P61620 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a1P61620 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sec61a1P61620 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.29■□□□□ 0.04
Sec61a1P61620 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a1P61620 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sec61a1P61620 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.28■□□□□ 0.04
Sec61a1P61620 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a1P61620 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a1P61620 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a1P61620 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.28■□□□□ 0.04
Sec61a1P61620 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.28■□□□□ 0.04
Sec61a1P61620 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Sec61a1P61620 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.28■□□□□ 0.04
Sec61a1P61620 Gm20049-201ENSMUST00000219950 730 ntBASIC15.28■□□□□ 0.04
Sec61a1P61620 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a1P61620 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a1P61620 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a1P61620 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sec61a1P61620 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a1P61620 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a1P61620 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a1P61620 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a1P61620 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a1P61620 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a1P61620 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sec61a1P61620 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sec61a1P61620 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sec61a1P61620 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Sec61a1P61620 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sec61a1P61620 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sec61a1P61620 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Sec61a1P61620 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.27■□□□□ 0.04
Sec61a1P61620 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Sec61a1P61620 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sec61a1P61620 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms