Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl35aO55142 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl35aO55142 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rpl35aO55142 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rpl35aO55142 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl35aO55142 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl35aO55142 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl35aO55142 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl35aO55142 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl35aO55142 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.93□□□□□ -0.34
Rpl35aO55142 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl35aO55142 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.93□□□□□ -0.34
Rpl35aO55142 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl35aO55142 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl35aO55142 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.93□□□□□ -0.34
Rpl35aO55142 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Rpl35aO55142 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.93□□□□□ -0.34
Rpl35aO55142 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpl35aO55142 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.92□□□□□ -0.34
Rpl35aO55142 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rpl35aO55142 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.92□□□□□ -0.34
Rpl35aO55142 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.92□□□□□ -0.34
Rpl35aO55142 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.92□□□□□ -0.34
Rpl35aO55142 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpl35aO55142 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rpl35aO55142 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 Mir7071-201ENSMUST00000184847 69 ntBASIC12.91□□□□□ -0.34
Rpl35aO55142 Gm29791-202ENSMUST00000207888 369 ntBASIC12.91□□□□□ -0.34
Rpl35aO55142 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Rpl35aO55142 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.91□□□□□ -0.34
Rpl35aO55142 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
Rpl35aO55142 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rpl35aO55142 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rpl35aO55142 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.91□□□□□ -0.34
Rpl35aO55142 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rpl35aO55142 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl35aO55142 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl35aO55142 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl35aO55142 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl35aO55142 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl35aO55142 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl35aO55142 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rpl35aO55142 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl35aO55142 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl35aO55142 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.9□□□□□ -0.34
Rpl35aO55142 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl35aO55142 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.9□□□□□ -0.34
Rpl35aO55142 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl35aO55142 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rpl35aO55142 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rpl35aO55142 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl35aO55142 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rpl35aO55142 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rpl35aO55142 Gm10418-201ENSMUST00000100943 576 ntBASIC12.9□□□□□ -0.34
Rpl35aO55142 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms