Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav13n-2A0A0G2JF93 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Gm9207-201ENSMUST00000198773 1115 ntBASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Gm19094-201ENSMUST00000209791 1246 ntBASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-2A0A0G2JF93 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13n-2A0A0G2JF93 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13n-2A0A0G2JF93 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13n-2A0A0G2JF93 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Haglr-201ENSMUST00000100000 2085 ntBASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Gm7160-202ENSMUST00000188519 1027 ntBASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 CT030146.1-201ENSMUST00000220919 217 ntBASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Gm5576-201ENSMUST00000075809 1236 ntBASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-2A0A0G2JF93 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms