Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.22□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.22□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-52A0A0A6YXC3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.22□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.22□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.22□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Timm23-208ENSMUST00000226683 750 ntBASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ighv1-52A0A0A6YXC3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.2□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.2□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.2□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.2□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.2□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-52A0A0A6YXC3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.19□□□□□ -0.3
Ighv1-52A0A0A6YXC3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.19□□□□□ -0.3
Ighv1-52A0A0A6YXC3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.19□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-52A0A0A6YXC3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-52A0A0A6YXC3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.18□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-52A0A0A6YXC3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms