Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 AC005181.1-201ENST00000604782 1256 ntBASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 GABARAPL3-202ENST00000624044 1851 ntBASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 OR10C1-204ENST00000622521 1039 ntBASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HLA-DRB4X5D2U9 AC092720.2-201ENST00000602388 1665 ntBASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 KRT8P36-201ENST00000489121 1440 ntBASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 AC073314.1-201ENST00000568729 2216 ntBASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 MCRIP2P1-201ENST00000394346 511 ntBASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HLA-DRB4X5D2U9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HLA-DRB4X5D2U9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
HLA-DRB4X5D2U9 BX323043.1-201ENST00000641006 1765 ntBASIC15.08■□□□□ 0.01
HLA-DRB4X5D2U9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
HLA-DRB4X5D2U9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
HLA-DRB4X5D2U9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HLA-DRB4X5D2U9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HLA-DRB4X5D2U9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HLA-DRB4X5D2U9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
HLA-DRB4X5D2U9 AC020907.5-201ENST00000624372 1936 ntBASIC15.08■□□□□ 0
HLA-DRB4X5D2U9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.08■□□□□ 0
HLA-DRB4X5D2U9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
HLA-DRB4X5D2U9 CDCA4P2-201ENST00000441182 718 ntBASIC15.08■□□□□ 0
HLA-DRB4X5D2U9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC15.08■□□□□ 0
HLA-DRB4X5D2U9 AC026185.1-201ENST00000445748 174 ntBASIC15.08■□□□□ 0
HLA-DRB4X5D2U9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.08■□□□□ 0
HLA-DRB4X5D2U9 AL356652.1-201ENST00000615962 565 ntBASIC15.08■□□□□ 0
HLA-DRB4X5D2U9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms