Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TMEM54Q969K7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TMEM54Q969K7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
TMEM54Q969K7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM54Q969K7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM54Q969K7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.76■□□□□ 0.43
TMEM54Q969K7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM54Q969K7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM54Q969K7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM54Q969K7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM54Q969K7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM54Q969K7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM54Q969K7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM54Q969K7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM54Q969K7 KRT8P20-201ENST00000423953 1409 ntBASIC17.75■□□□□ 0.43
TMEM54Q969K7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TMEM54Q969K7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM54Q969K7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM54Q969K7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM54Q969K7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEM54Q969K7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TMEM54Q969K7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM54Q969K7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TMEM54Q969K7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEM54Q969K7 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEM54Q969K7 AC023632.3-201ENST00000521633 145 ntBASIC17.75■□□□□ 0.43
TMEM54Q969K7 MIR4758-201ENST00000577688 71 ntBASIC17.75■□□□□ 0.43
TMEM54Q969K7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEM54Q969K7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.75■□□□□ 0.43
TMEM54Q969K7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM54Q969K7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
TMEM54Q969K7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEM54Q969K7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM54Q969K7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TMEM54Q969K7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM54Q969K7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM54Q969K7 TCF3P1-201ENST00000423021 1937 ntBASIC17.74■□□□□ 0.43
TMEM54Q969K7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM54Q969K7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM54Q969K7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM54Q969K7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
TMEM54Q969K7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TMEM54Q969K7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM54Q969K7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM54Q969K7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM54Q969K7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
TMEM54Q969K7 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.74■□□□□ 0.43
TMEM54Q969K7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM54Q969K7 AC091874.3-201ENST00000512672 1195 ntBASIC17.74■□□□□ 0.43
TMEM54Q969K7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM54Q969K7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM54Q969K7 AL391422.3-201ENST00000603791 2761 ntBASIC17.74■□□□□ 0.43
TMEM54Q969K7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TMEM54Q969K7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TMEM54Q969K7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM54Q969K7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM54Q969K7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM54Q969K7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM54Q969K7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM54Q969K7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM54Q969K7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TMEM54Q969K7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TMEM54Q969K7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEM54Q969K7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.73■□□□□ 0.43
TMEM54Q969K7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM54Q969K7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEM54Q969K7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM54Q969K7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEM54Q969K7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TMEM54Q969K7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM54Q969K7 AC104771.1-201ENST00000603335 964 ntBASIC17.73■□□□□ 0.43
TMEM54Q969K7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM54Q969K7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM54Q969K7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM54Q969K7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM54Q969K7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM54Q969K7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM54Q969K7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TMEM54Q969K7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM54Q969K7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.72■□□□□ 0.43
TMEM54Q969K7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TMEM54Q969K7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM54Q969K7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM54Q969K7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TMEM54Q969K7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM54Q969K7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TMEM54Q969K7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM54Q969K7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
TMEM54Q969K7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM54Q969K7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM54Q969K7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TMEM54Q969K7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM54Q969K7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM54Q969K7 HLA-G-202ENST00000376815 851 ntBASIC17.72■□□□□ 0.43
TMEM54Q969K7 HLA-G-203ENST00000376818 1127 ntBASIC17.72■□□□□ 0.43
TMEM54Q969K7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TMEM54Q969K7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.72■□□□□ 0.43
TMEM54Q969K7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.72■□□□□ 0.43
TMEM54Q969K7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.72■□□□□ 0.43
TMEM54Q969K7 AL138781.1-201ENST00000566567 1274 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms