Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 Gm7153-201ENSMUST00000117092 455 ntBASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 Gm12085-201ENSMUST00000119263 940 ntBASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga6Q91XY2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga6Q91XY2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga6Q91XY2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga6Q91XY2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga6Q91XY2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga6Q91XY2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga6Q91XY2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga6Q91XY2 Gm27704-201ENSMUST00000185094 107 ntBASIC17.3■□□□□ 0.36
Pcdhga6Q91XY2 Gm44771-201ENSMUST00000206975 626 ntBASIC17.3■□□□□ 0.36
Pcdhga6Q91XY2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga6Q91XY2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga6Q91XY2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga6Q91XY2 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.3■□□□□ 0.36
Pcdhga6Q91XY2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhga6Q91XY2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga6Q91XY2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdhga6Q91XY2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga6Q91XY2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga6Q91XY2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhga6Q91XY2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga6Q91XY2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Pcdhga6Q91XY2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga6Q91XY2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga6Q91XY2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdhga6Q91XY2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga6Q91XY2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pcdhga6Q91XY2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.29■□□□□ 0.36
Pcdhga6Q91XY2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga6Q91XY2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga6Q91XY2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga6Q91XY2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pcdhga6Q91XY2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhga6Q91XY2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdhga6Q91XY2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga6Q91XY2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga6Q91XY2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga6Q91XY2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga6Q91XY2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga6Q91XY2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga6Q91XY2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Pcdhga6Q91XY2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga6Q91XY2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhga6Q91XY2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga6Q91XY2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga6Q91XY2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga6Q91XY2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga6Q91XY2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.28■□□□□ 0.36
Pcdhga6Q91XY2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.28■□□□□ 0.36
Pcdhga6Q91XY2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga6Q91XY2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga6Q91XY2 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.28■□□□□ 0.36
Pcdhga6Q91XY2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga6Q91XY2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhga6Q91XY2 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.28■□□□□ 0.36
Pcdhga6Q91XY2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.28■□□□□ 0.36
Pcdhga6Q91XY2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhga6Q91XY2 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.28■□□□□ 0.36
Pcdhga6Q91XY2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga6Q91XY2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhga6Q91XY2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhga6Q91XY2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga6Q91XY2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga6Q91XY2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga6Q91XY2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga6Q91XY2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga6Q91XY2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga6Q91XY2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga6Q91XY2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdhga6Q91XY2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.27■□□□□ 0.36
Pcdhga6Q91XY2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga6Q91XY2 Gm38027-201ENSMUST00000192315 235 ntBASIC17.27■□□□□ 0.36
Pcdhga6Q91XY2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.27■□□□□ 0.36
Pcdhga6Q91XY2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdhga6Q91XY2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga6Q91XY2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhga6Q91XY2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhga6Q91XY2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhga6Q91XY2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhga6Q91XY2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhga6Q91XY2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms