Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC89Q8N998 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC89Q8N998 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CCDC89Q8N998 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.83■□□□□ 0.93
CCDC89Q8N998 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
CCDC89Q8N998 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC89Q8N998 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CCDC89Q8N998 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC89Q8N998 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC89Q8N998 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC89Q8N998 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC89Q8N998 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC89Q8N998 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC89Q8N998 DPP3P2-201ENST00000416030 1696 ntBASIC20.83■□□□□ 0.92
CCDC89Q8N998 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CCDC89Q8N998 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC89Q8N998 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC89Q8N998 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC89Q8N998 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CCDC89Q8N998 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC89Q8N998 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC89Q8N998 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC89Q8N998 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC89Q8N998 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC89Q8N998 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC89Q8N998 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC89Q8N998 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC89Q8N998 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC89Q8N998 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC89Q8N998 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC89Q8N998 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC89Q8N998 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC89Q8N998 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC89Q8N998 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC89Q8N998 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CCDC89Q8N998 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC89Q8N998 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC89Q8N998 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC89Q8N998 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC89Q8N998 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC89Q8N998 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC89Q8N998 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
CCDC89Q8N998 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC89Q8N998 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC89Q8N998 AC125437.2-201ENST00000625180 2167 ntBASIC20.81■□□□□ 0.92
CCDC89Q8N998 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC89Q8N998 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC89Q8N998 AC097381.1-201ENST00000429019 1296 ntBASIC20.81■□□□□ 0.92
CCDC89Q8N998 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC89Q8N998 KRT18P61-201ENST00000585825 1298 ntBASIC20.81■□□□□ 0.92
CCDC89Q8N998 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.81■□□□□ 0.92
CCDC89Q8N998 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CCDC89Q8N998 MYCNOS-205ENST00000641950 531 ntBASIC20.81■□□□□ 0.92
CCDC89Q8N998 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC89Q8N998 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC89Q8N998 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC89Q8N998 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CCDC89Q8N998 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC89Q8N998 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC89Q8N998 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC89Q8N998 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC89Q8N998 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.8■□□□□ 0.92
CCDC89Q8N998 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC89Q8N998 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC89Q8N998 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC89Q8N998 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC89Q8N998 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC89Q8N998 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC89Q8N998 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC89Q8N998 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC89Q8N998 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC89Q8N998 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
CCDC89Q8N998 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC89Q8N998 AC138932.1-201ENST00000534164 6830 ntBASIC20.8■□□□□ 0.92
CCDC89Q8N998 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC89Q8N998 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC89Q8N998 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC89Q8N998 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC89Q8N998 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC89Q8N998 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC89Q8N998 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC89Q8N998 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC89Q8N998 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
CCDC89Q8N998 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC89Q8N998 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC89Q8N998 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
CCDC89Q8N998 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC89Q8N998 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC89Q8N998 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CCDC89Q8N998 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC89Q8N998 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC89Q8N998 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CCDC89Q8N998 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC89Q8N998 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC89Q8N998 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC89Q8N998 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC89Q8N998 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC89Q8N998 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC89Q8N998 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC89Q8N998 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms