Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slc46a2Q8CA03 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc46a2Q8CA03 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slc46a2Q8CA03 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.75■□□□□ 0.27
Slc46a2Q8CA03 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc46a2Q8CA03 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc46a2Q8CA03 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc46a2Q8CA03 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slc46a2Q8CA03 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc46a2Q8CA03 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc46a2Q8CA03 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Slc46a2Q8CA03 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc46a2Q8CA03 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc46a2Q8CA03 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc46a2Q8CA03 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc46a2Q8CA03 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.74■□□□□ 0.27
Slc46a2Q8CA03 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Slc46a2Q8CA03 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc46a2Q8CA03 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc46a2Q8CA03 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slc46a2Q8CA03 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc46a2Q8CA03 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc46a2Q8CA03 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc46a2Q8CA03 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc46a2Q8CA03 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc46a2Q8CA03 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.73■□□□□ 0.27
Slc46a2Q8CA03 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc46a2Q8CA03 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc46a2Q8CA03 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc46a2Q8CA03 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc46a2Q8CA03 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Slc46a2Q8CA03 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc46a2Q8CA03 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc46a2Q8CA03 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Slc46a2Q8CA03 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.72■□□□□ 0.27
Slc46a2Q8CA03 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc46a2Q8CA03 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc46a2Q8CA03 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc46a2Q8CA03 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc46a2Q8CA03 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.72■□□□□ 0.27
Slc46a2Q8CA03 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc46a2Q8CA03 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc46a2Q8CA03 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc46a2Q8CA03 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Slc46a2Q8CA03 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Slc46a2Q8CA03 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.72■□□□□ 0.27
Slc46a2Q8CA03 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.72■□□□□ 0.27
Slc46a2Q8CA03 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc46a2Q8CA03 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Slc46a2Q8CA03 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc46a2Q8CA03 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc46a2Q8CA03 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Slc46a2Q8CA03 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc46a2Q8CA03 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc46a2Q8CA03 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc46a2Q8CA03 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc46a2Q8CA03 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc46a2Q8CA03 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc46a2Q8CA03 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc46a2Q8CA03 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc46a2Q8CA03 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc46a2Q8CA03 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc46a2Q8CA03 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc46a2Q8CA03 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc46a2Q8CA03 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.71■□□□□ 0.27
Slc46a2Q8CA03 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.71■□□□□ 0.27
Slc46a2Q8CA03 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc46a2Q8CA03 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc46a2Q8CA03 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.71■□□□□ 0.27
Slc46a2Q8CA03 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.71■□□□□ 0.27
Slc46a2Q8CA03 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.71■□□□□ 0.27
Slc46a2Q8CA03 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc46a2Q8CA03 Gm10493-201ENSMUST00000097270 612 ntBASIC16.71■□□□□ 0.27
Slc46a2Q8CA03 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc46a2Q8CA03 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc46a2Q8CA03 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc46a2Q8CA03 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc46a2Q8CA03 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc46a2Q8CA03 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc46a2Q8CA03 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc46a2Q8CA03 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Slc46a2Q8CA03 Gm29257-201ENSMUST00000186115 639 ntBASIC16.7■□□□□ 0.26
Slc46a2Q8CA03 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc46a2Q8CA03 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc46a2Q8CA03 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.7■□□□□ 0.26
Slc46a2Q8CA03 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc46a2Q8CA03 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc46a2Q8CA03 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc46a2Q8CA03 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc46a2Q8CA03 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc46a2Q8CA03 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc46a2Q8CA03 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Slc46a2Q8CA03 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Slc46a2Q8CA03 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Slc46a2Q8CA03 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc46a2Q8CA03 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.69■□□□□ 0.26
Slc46a2Q8CA03 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc46a2Q8CA03 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.69■□□□□ 0.26
Slc46a2Q8CA03 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc46a2Q8CA03 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms