Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Gm9207-201ENSMUST00000198773 1115 ntBASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav3-3Q5R1C3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.08□□□□□ -0.31
Trav3-3Q5R1C3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav3-3Q5R1C3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav3-3Q5R1C3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trav3-3Q5R1C3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-3Q5R1C3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-3Q5R1C3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms