Protein–RNA interactions for Protein: P36100

TFA1, Transcription initiation factor IIE subunit alpha, yeastyeast

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TFA1P36100 KRE33YNL132W 3171 nt4.3□□□□□ -1.72
TFA1P36100 COX12YLR038C 252 nt4.3□□□□□ -1.72
TFA1P36100 CMC4YMR194C-B 222 nt4.3□□□□□ -1.72
TFA1P36100 ALK1YGL021W 2283 nt4.29□□□□□ -1.72
TFA1P36100 YDR521WYDR521W 336 nt4.29□□□□□ -1.72
TFA1P36100 RTT107YHR154W 3213 nt4.28□□□□□ -1.72
TFA1P36100 RPL33AYPL143W 324 nt4.28□□□□□ -1.72
TFA1P36100 SYH1YPL105C 2550 nt4.28□□□□□ -1.72
TFA1P36100 ATG26YLR189C 3597 nt4.27□□□□□ -1.73
TFA1P36100 SGM1YJR134C 2124 nt4.27□□□□□ -1.73
TFA1P36100 RSE1YML049C 4086 nt4.27□□□□□ -1.73
TFA1P36100 YCR038W-AYCR038W-A 126 nt4.27□□□□□ -1.73
TFA1P36100 SPO71YDR104C 3738 nt4.26□□□□□ -1.73
TFA1P36100 SCP160YJL080C 3669 nt4.26□□□□□ -1.73
TFA1P36100 YDR354C-AYDR354C-A 144 nt4.26□□□□□ -1.73
TFA1P36100 YPR203WYPR203W 309 nt4.26□□□□□ -1.73
TFA1P36100 NAB6YML117W 3405 nt4.25□□□□□ -1.73
TFA1P36100 STE6YKL209C 3873 nt4.25□□□□□ -1.73
TFA1P36100 YLR278CYLR278C 4026 nt4.25□□□□□ -1.73
TFA1P36100 YIL142C-AYIL142C-A 333 nt4.25□□□□□ -1.73
TFA1P36100 IRE1YHR079C 3348 nt4.25□□□□□ -1.73
TFA1P36100 SPO14YKR031C 5052 nt4.24□□□□□ -1.73
TFA1P36100 YDL118WYDL118W 381 nt4.24□□□□□ -1.73
TFA1P36100 SUP56tL(CAA)A 82 nt4.24□□□□□ -1.73
TFA1P36100 SUP53tL(CAA)C 82 nt4.24□□□□□ -1.73
TFA1P36100 tL(CAA)DtL(CAA)D 82 nt4.24□□□□□ -1.73
TFA1P36100 tL(CAA)G1tL(CAA)G1 82 nt4.24□□□□□ -1.73
TFA1P36100 SUP54tL(CAA)G2 82 nt4.24□□□□□ -1.73
TFA1P36100 tL(CAA)G3tL(CAA)G3 82 nt4.24□□□□□ -1.73
TFA1P36100 tL(CAA)KtL(CAA)K 82 nt4.24□□□□□ -1.73
TFA1P36100 tL(CAA)LtL(CAA)L 82 nt4.24□□□□□ -1.73
TFA1P36100 tL(CAA)MtL(CAA)M 82 nt4.24□□□□□ -1.73
TFA1P36100 tL(CAA)NtL(CAA)N 82 nt4.24□□□□□ -1.73
TFA1P36100 YGL041C-BYGL041C-B 183 nt4.24□□□□□ -1.73
TFA1P36100 YIL174WYIL174W 228 nt4.24□□□□□ -1.73
TFA1P36100 YJL222W-AYJL222W-A 228 nt4.24□□□□□ -1.73
TFA1P36100 SKP2YNL311C 2292 nt4.24□□□□□ -1.73
TFA1P36100 TDA9YML081W 3756 nt4.22□□□□□ -1.73
TFA1P36100 YJL026C-AYJL026C-A 222 nt4.22□□□□□ -1.73
TFA1P36100 PKH2YOL100W 3246 nt4.21□□□□□ -1.73
TFA1P36100 MLH1YMR167W 2310 nt4.21□□□□□ -1.74
TFA1P36100 UBP1YDL122W 2430 nt4.2□□□□□ -1.74
TFA1P36100 PRP8YHR165C 7242 nt4.2□□□□□ -1.74
TFA1P36100 YKR075W-AYKR075W-A 270 nt4.2□□□□□ -1.74
TFA1P36100 COP1YDL145C 3606 nt4.2□□□□□ -1.74
TFA1P36100 RPL37BYDR500C 267 nt4.19□□□□□ -1.74
TFA1P36100 SOM1YEL059C-A 225 nt4.18□□□□□ -1.74
TFA1P36100 YOR019WYOR019W 2193 nt4.18□□□□□ -1.74
TFA1P36100 SLI15YBR156C 2097 nt4.18□□□□□ -1.74
TFA1P36100 RTT101YJL047C 2529 nt4.17□□□□□ -1.74
TFA1P36100 ESL2YKR096W 3588 nt4.17□□□□□ -1.74
TFA1P36100 SAP185YJL098W 3177 nt4.17□□□□□ -1.74
TFA1P36100 FRK1YPL141C 2598 nt4.16□□□□□ -1.74
TFA1P36100 YMR175W-AYMR175W-A 195 nt4.15□□□□□ -1.75
TFA1P36100 PRP5YBR237W 2550 nt4.15□□□□□ -1.75
TFA1P36100 TTI1YKL033W 3117 nt4.15□□□□□ -1.75
TFA1P36100 COG4YPR105C 2586 nt4.14□□□□□ -1.75
TFA1P36100 YCR087C-AYCR087C-A 462 nt4.14□□□□□ -1.75
TFA1P36100 CIN8YEL061C 3003 nt4.14□□□□□ -1.75
TFA1P36100 DYN1YKR054C 12279 nt4.14□□□□□ -1.75
TFA1P36100 GIP3YPL137C 3831 nt4.13□□□□□ -1.75
TFA1P36100 STF2YGR008C 255 nt4.13□□□□□ -1.75
TFA1P36100 YIL002W-AYIL002W-A 210 nt4.13□□□□□ -1.75
TFA1P36100 APL1YJR005W 2103 nt4.13□□□□□ -1.75
TFA1P36100 TAO3YIL129C 7131 nt4.11□□□□□ -1.75
TFA1P36100 CHS6YJL099W 2241 nt4.1□□□□□ -1.75
TFA1P36100 RPN1YHR027C 2982 nt4.1□□□□□ -1.75
TFA1P36100 NEW1YPL226W 3591 nt4.09□□□□□ -1.76
TFA1P36100 RAV1YJR033C 4074 nt4.09□□□□□ -1.76
TFA1P36100 YLL054CYLL054C 2532 nt4.08□□□□□ -1.76
TFA1P36100 REC8YPR007C 2043 nt4.08□□□□□ -1.76
TFA1P36100 YSP2YDR326C 4317 nt4.08□□□□□ -1.76
TFA1P36100 TRM3YDL112W 4311 nt4.07□□□□□ -1.76
TFA1P36100 YNL144CYNL144C 2223 nt4.07□□□□□ -1.76
TFA1P36100 ADR1YDR216W 3972 nt4.07□□□□□ -1.76
TFA1P36100 YGR109W-BYGR109W-B 4644 nt4.06□□□□□ -1.76
TFA1P36100 TIM9YEL020W-A 264 nt4.06□□□□□ -1.76
TFA1P36100 GCN2YDR283C 4980 nt4.06□□□□□ -1.76
TFA1P36100 SEY1YOR165W 2331 nt4.05□□□□□ -1.76
TFA1P36100 tS(GCU)Q1tS(GCU)Q1 86 nt4.05□□□□□ -1.76
TFA1P36100 YPR097WYPR097W 3222 nt4.05□□□□□ -1.76
TFA1P36100 AKR1YDR264C 2295 nt4.03□□□□□ -1.76
TFA1P36100 INO80YGL150C 4470 nt4.03□□□□□ -1.76
TFA1P36100 IST2YBR086C 2841 nt4.02□□□□□ -1.77
TFA1P36100 IRC8YJL051W 2469 nt4.01□□□□□ -1.77
TFA1P36100 tK(UUU)DtK(UUU)D 73 nt4.01□□□□□ -1.77
TFA1P36100 tK(UUU)G1tK(UUU)G1 73 nt4.01□□□□□ -1.77
TFA1P36100 tK(UUU)G2tK(UUU)G2 73 nt4.01□□□□□ -1.77
TFA1P36100 tK(UUU)KtK(UUU)K 73 nt4.01□□□□□ -1.77
TFA1P36100 tK(UUU)LtK(UUU)L 73 nt4.01□□□□□ -1.77
TFA1P36100 tK(UUU)OtK(UUU)O 73 nt4.01□□□□□ -1.77
TFA1P36100 tK(UUU)PtK(UUU)P 73 nt4.01□□□□□ -1.77
TFA1P36100 PSD2YGR170W 3417 nt4.01□□□□□ -1.77
TFA1P36100 STE11YLR362W 2154 nt4□□□□□ -1.77
TFA1P36100 YGL182CYGL182C 324 nt4□□□□□ -1.77
TFA1P36100 YMR122W-AYMR122W-A 255 nt4□□□□□ -1.77
TFA1P36100 STB6YKL072W 2301 nt3.99□□□□□ -1.77
TFA1P36100 UBP15YMR304W 3693 nt3.99□□□□□ -1.77
TFA1P36100 RPA190YOR341W 4995 nt3.99□□□□□ -1.77
TFA1P36100 YDL206WYDL206W 2289 nt3.98□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 55.9 ms