Protein–RNA interactions for Protein: P09084

Pax1, Paired box protein Pax-1, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax1P09084 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pax1P09084 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pax1P09084 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pax1P09084 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pax1P09084 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pax1P09084 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pax1P09084 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pax1P09084 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pax1P09084 Gm13216-201ENSMUST00000117145 591 ntBASIC14.14□□□□□ -0.15
Pax1P09084 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.14□□□□□ -0.15
Pax1P09084 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.14□□□□□ -0.15
Pax1P09084 Gm42778-201ENSMUST00000199644 553 ntBASIC14.14□□□□□ -0.15
Pax1P09084 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.14□□□□□ -0.15
Pax1P09084 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pax1P09084 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pax1P09084 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pax1P09084 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pax1P09084 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pax1P09084 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pax1P09084 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pax1P09084 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pax1P09084 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pax1P09084 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pax1P09084 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pax1P09084 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.13□□□□□ -0.15
Pax1P09084 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pax1P09084 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.13□□□□□ -0.15
Pax1P09084 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pax1P09084 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pax1P09084 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pax1P09084 Gm10493-201ENSMUST00000097270 612 ntBASIC14.13□□□□□ -0.15
Pax1P09084 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pax1P09084 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pax1P09084 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pax1P09084 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pax1P09084 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pax1P09084 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pax1P09084 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pax1P09084 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pax1P09084 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pax1P09084 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pax1P09084 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pax1P09084 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.12□□□□□ -0.15
Pax1P09084 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pax1P09084 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pax1P09084 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pax1P09084 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pax1P09084 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pax1P09084 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pax1P09084 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pax1P09084 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.12□□□□□ -0.15
Pax1P09084 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pax1P09084 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.12□□□□□ -0.15
Pax1P09084 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pax1P09084 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.12□□□□□ -0.15
Pax1P09084 Gm25007-201ENSMUST00000083808 133 ntBASIC14.12□□□□□ -0.15
Pax1P09084 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pax1P09084 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pax1P09084 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pax1P09084 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pax1P09084 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pax1P09084 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pax1P09084 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pax1P09084 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pax1P09084 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pax1P09084 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pax1P09084 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.11□□□□□ -0.15
Pax1P09084 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Pax1P09084 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Pax1P09084 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pax1P09084 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pax1P09084 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pax1P09084 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pax1P09084 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pax1P09084 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pax1P09084 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pax1P09084 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pax1P09084 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pax1P09084 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pax1P09084 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pax1P09084 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pax1P09084 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pax1P09084 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pax1P09084 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pax1P09084 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.1□□□□□ -0.15
Pax1P09084 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.1□□□□□ -0.15
Pax1P09084 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.1□□□□□ -0.15
Pax1P09084 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pax1P09084 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pax1P09084 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pax1P09084 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pax1P09084 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pax1P09084 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pax1P09084 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pax1P09084 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Pax1P09084 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pax1P09084 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Pax1P09084 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pax1P09084 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pax1P09084 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms