Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-2D3Z4R4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Gm40881-201ENSMUST00000223397 166 ntBASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx6-2D3Z4R4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-2D3Z4R4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-2D3Z4R4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-2D3Z4R4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-2D3Z4R4 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-2D3Z4R4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-2D3Z4R4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-2D3Z4R4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-2D3Z4R4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-2D3Z4R4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.21□□□□□ -0.13
Nkx6-2D3Z4R4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-2D3Z4R4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-2D3Z4R4 Etf1-202ENSMUST00000180351 108 ntBASIC14.21□□□□□ -0.13
Nkx6-2D3Z4R4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-2D3Z4R4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.21□□□□□ -0.13
Nkx6-2D3Z4R4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-2D3Z4R4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-2D3Z4R4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-2D3Z4R4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
Nkx6-2D3Z4R4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-2D3Z4R4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Nkx6-2D3Z4R4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx6-2D3Z4R4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx6-2D3Z4R4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Nkx6-2D3Z4R4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Gm9870-201ENSMUST00000063874 645 ntBASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-2D3Z4R4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-2D3Z4R4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nkx6-2D3Z4R4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-2D3Z4R4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-2D3Z4R4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-2D3Z4R4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-2D3Z4R4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-2D3Z4R4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-2D3Z4R4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-2D3Z4R4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC14.19□□□□□ -0.14
Nkx6-2D3Z4R4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-2D3Z4R4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-2D3Z4R4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-2D3Z4R4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms