Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.43■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.43■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Gm30025-201ENSMUST00000218555 728 ntBASIC18.43■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.43■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.42■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.42■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.42■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.41■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.4■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.4■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.39■□□□□ 0.54
Mindy4b-psA0A1W2P7H6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.39■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.39■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.39■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.38■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.37■□□□□ 0.53
Mindy4b-psA0A1W2P7H6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms