Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gm15743-202ENSMUST00000182690 1901 ntBASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Trav9d-4A0A0G2JG37 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav9d-4A0A0G2JG37 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gm8309-201ENSMUST00000206627 1448 ntBASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Hivep3-201ENSMUST00000084306 2973 ntBASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gm21956-201ENSMUST00000179946 522 ntBASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Gm43672-201ENSMUST00000199072 1731 ntBASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav9d-4A0A0G2JG37 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9d-4A0A0G2JG37 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9d-4A0A0G2JG37 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9d-4A0A0G2JG37 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Trav9d-4A0A0G2JG37 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9d-4A0A0G2JG37 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9d-4A0A0G2JG37 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9d-4A0A0G2JG37 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav9d-4A0A0G2JG37 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC11.96□□□□□ -0.5
Trav9d-4A0A0G2JG37 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Trav9d-4A0A0G2JG37 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trav9d-4A0A0G2JG37 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms