Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-1A0A075B606 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-1A0A075B606 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-1A0A075B606 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav13d-1A0A075B606 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Trav13d-1A0A075B606 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-1A0A075B606 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav13d-1A0A075B606 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trav13d-1A0A075B606 Mir6349-201ENSMUST00000184059 97 ntBASIC12.78□□□□□ -0.36
Trav13d-1A0A075B606 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-1A0A075B606 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trav13d-1A0A075B606 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-1A0A075B606 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-1A0A075B606 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-1A0A075B606 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-1A0A075B606 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.78□□□□□ -0.36
Trav13d-1A0A075B606 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-1A0A075B606 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-1A0A075B606 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav13d-1A0A075B606 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13d-1A0A075B606 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav13d-1A0A075B606 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13d-1A0A075B606 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Trav13d-1A0A075B606 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trav13d-1A0A075B606 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13d-1A0A075B606 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13d-1A0A075B606 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13d-1A0A075B606 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13d-1A0A075B606 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13d-1A0A075B606 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trav13d-1A0A075B606 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trav13d-1A0A075B606 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav13d-1A0A075B606 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.77□□□□□ -0.37
Trav13d-1A0A075B606 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.77□□□□□ -0.37
Trav13d-1A0A075B606 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav13d-1A0A075B606 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13d-1A0A075B606 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13d-1A0A075B606 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13d-1A0A075B606 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13d-1A0A075B606 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13d-1A0A075B606 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13d-1A0A075B606 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13d-1A0A075B606 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13d-1A0A075B606 Gm45906-201ENSMUST00000208911 1430 ntBASIC12.77□□□□□ -0.37
Trav13d-1A0A075B606 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.77□□□□□ -0.37
Trav13d-1A0A075B606 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13d-1A0A075B606 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13d-1A0A075B606 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13d-1A0A075B606 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13d-1A0A075B606 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13d-1A0A075B606 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Mir5122-201ENSMUST00000175004 89 ntBASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13d-1A0A075B606 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms