Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 BMS1P8-201ENST00000565049 1178 ntBASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 RN7SL25P-201ENST00000583862 260 ntBASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 AC008507.2-201ENST00000588402 1176 ntBASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 AL161729.2-201ENST00000605700 456 ntBASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 AC109809.1-201ENST00000619665 545 ntBASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 AC004862.1-209ENST00000437763 1678 ntTSL 5 BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 NF1P7-201ENST00000612076 1530 ntBASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 CTAGE3P-201ENST00000454280 2404 ntBASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AC074198.1-201ENST00000506546 1397 ntBASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AC092952.1-201ENST00000397646 1209 ntBASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 RANP7-201ENST00000418085 644 ntBASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 RN7SL414P-201ENST00000469545 294 ntBASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AC087385.2-201ENST00000477729 498 ntBASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AC108688.1-201ENST00000485817 713 ntBASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AC026700.1-201ENST00000512074 544 ntBASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 NACAP1-202ENST00000519039 641 ntBASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 OR4F28P-201ENST00000559128 938 ntBASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 CYP4A44P-201ENST00000569984 154 ntBASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 OR4F8P-201ENST00000589943 937 ntBASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AL138960.2-201ENST00000625145 535 ntBASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AC022150.4-201ENST00000598322 2848 ntBASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AC127024.8-201ENST00000623719 2094 ntBASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AL445235.1-201ENST00000431202 1747 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CDK5RAP1Q96SZ6 AC016251.1-201ENST00000624299 4198 ntBASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 FAM122C-202ENST00000370785 1344 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 U3.1-201ENST00000362500 215 ntBASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 RNA5SP389-201ENST00000362610 115 ntBASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 RNA5SP226-201ENST00000362653 115 ntBASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 RNA5SP161-201ENST00000363871 115 ntBASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 SNORA70I-201ENST00000384544 135 ntBASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 OLA1P1-201ENST00000396387 1189 ntBASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 USP9YP19-201ENST00000412165 485 ntBASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 RPSAP41-201ENST00000439695 860 ntBASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 AC140479.1-201ENST00000440423 337 ntBASIC8.11□□□□□ -1.11
CDK5RAP1Q96SZ6 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms