Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC009110.1-201ENST00000415422 558 ntTSL 4 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 OR2L1P-201ENST00000422727 938 ntBASIC7.26□□□□□ -1.25
SNX18Q96RF0 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 CFL1P8-201ENST00000436148 475 ntBASIC7.26□□□□□ -1.25
SNX18Q96RF0 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SNX18Q96RF0 RSL24D1P2-201ENST00000445584 366 ntBASIC7.26□□□□□ -1.25
SNX18Q96RF0 SFTPA3P-201ENST00000446429 367 ntBASIC7.26□□□□□ -1.25
SNX18Q96RF0 AZI2-207ENST00000457172 1136 ntTSL 5 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 AC004801.2-201ENST00000468202 779 ntBASIC7.26□□□□□ -1.25
SNX18Q96RF0 RN7SL685P-201ENST00000476271 298 ntBASIC7.26□□□□□ -1.25
SNX18Q96RF0 AC009269.1-202ENST00000484381 469 ntBASIC7.26□□□□□ -1.25
SNX18Q96RF0 LINC02016-201ENST00000488425 927 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SNX18Q96RF0 GGTA1P-204ENST00000488429 1104 ntBASIC7.26□□□□□ -1.25
SNX18Q96RF0 RN7SL864P-201ENST00000493457 285 ntBASIC7.26□□□□□ -1.25
SNX18Q96RF0 RN7SL434P-201ENST00000495872 271 ntBASIC7.26□□□□□ -1.25
SNX18Q96RF0 AC226119.2-201ENST00000513501 530 ntBASIC7.26□□□□□ -1.25
SNX18Q96RF0 AC100849.1-202ENST00000517949 562 ntTSL 3 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 AC091987.1-202ENST00000522464 789 ntTSL 3 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SNX18Q96RF0 AC009630.2-201ENST00000524133 570 ntTSL 5 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 AP005597.3-201ENST00000532369 799 ntBASIC7.26□□□□□ -1.25
SNX18Q96RF0 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 AC009779.4-201ENST00000554248 611 ntBASIC7.26□□□□□ -1.25
SNX18Q96RF0 GNG2-215ENST00000557376 573 ntTSL 4 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 AC007728.2-202ENST00000567728 1150 ntTSL 3 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SNX18Q96RF0 AC012301.1-201ENST00000586391 581 ntTSL 2 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 AC026790.2-201ENST00000606282 430 ntBASIC7.26□□□□□ -1.25
SNX18Q96RF0 AL136304.1-201ENST00000607790 509 ntBASIC7.26□□□□□ -1.25
SNX18Q96RF0 C20orf78-202ENST00000623418 606 ntTSL 2 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.26□□□□□ -1.25
SNX18Q96RF0 AC011592.1-201ENST00000624647 3634 ntBASIC7.26□□□□□ -1.25
SNX18Q96RF0 CLCN3P1-202ENST00000609203 1944 ntTSL 2 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 AC073342.2-201ENST00000595842 1800 ntBASIC7.26□□□□□ -1.25
SNX18Q96RF0 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SNX18Q96RF0 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SNX18Q96RF0 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SNX18Q96RF0 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC7.26□□□□□ -1.25
SNX18Q96RF0 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SNX18Q96RF0 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SNX18Q96RF0 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SNX18Q96RF0 NCOA4P3-201ENST00000513203 1877 ntBASIC7.26□□□□□ -1.25
SNX18Q96RF0 AC133552.3-201ENST00000572236 1869 ntBASIC7.26□□□□□ -1.25
SNX18Q96RF0 UIMC1-211ENST00000510698 1334 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SNX18Q96RF0 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SNX18Q96RF0 MSL3-201ENST00000312196 2345 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SNX18Q96RF0 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 MRPS17P1-201ENST00000596009 3130 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SNX18Q96RF0 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SNX18Q96RF0 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SNX18Q96RF0 AC092725.2-201ENST00000567658 1389 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 OR52K3P-202ENST00000641797 1729 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SNX18Q96RF0 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SNX18Q96RF0 RNA5SP426-201ENST00000362901 121 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 RPS24-202ENST00000372360 510 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
SNX18Q96RF0 RNU6-167P-201ENST00000384292 106 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 CCNYL3-201ENST00000407030 998 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 FAM218BP-201ENST00000408897 458 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 AL358452.1-201ENST00000414995 800 ntTSL 3 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 AKR1B1P8-201ENST00000418396 936 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 AC117434.1-201ENST00000419971 836 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 HSD3BP5-201ENST00000434856 1132 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 RPS28P8-201ENST00000435020 208 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 LINC01821-202ENST00000438505 882 ntTSL 4 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 AC239367.1-201ENST00000439389 936 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 AC104695.1-201ENST00000439700 849 ntTSL 3 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 GAPDHP28-201ENST00000455134 1003 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SNX18Q96RF0 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 LINC02517-201ENST00000509453 492 ntTSL 2 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 AC139783.1-201ENST00000515618 681 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 AC060765.1-202ENST00000518367 257 ntTSL 3 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 AC091175.1-201ENST00000522168 572 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 IGKV2D-14-201ENST00000522473 355 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 IGKV2OR22-4-201ENST00000523309 367 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 PGAM1P8-201ENST00000526979 453 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 SERPINA15P-201ENST00000529287 266 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 AP003119.1-201ENST00000533437 538 ntTSL 4 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 AC006065.2-201ENST00000536978 211 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 AC087894.2-201ENST00000541797 462 ntTSL 4 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 HIF1A-AS2-201ENST00000554254 533 ntTSL 3 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 C16orf45-203ENST00000561692 534 ntTSL 3 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 RN7SL154P-201ENST00000578043 324 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms