Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Mrpl55Q9CZ83 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Mrpl55Q9CZ83 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Mrpl55Q9CZ83 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Mrpl55Q9CZ83 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Mrpl55Q9CZ83 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Mrpl55Q9CZ83 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Mrpl55Q9CZ83 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Mrpl55Q9CZ83 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Mrpl55Q9CZ83 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Mrpl55Q9CZ83 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Mrpl55Q9CZ83 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Mrpl55Q9CZ83 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Mrpl55Q9CZ83 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Mrpl55Q9CZ83 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Mrpl55Q9CZ83 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Mrpl55Q9CZ83 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Mrpl55Q9CZ83 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.52□□□□□ -0.57
Mrpl55Q9CZ83 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mrpl55Q9CZ83 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mrpl55Q9CZ83 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mrpl55Q9CZ83 Gm6420-201ENSMUST00000193885 723 ntBASIC11.52□□□□□ -0.57
Mrpl55Q9CZ83 Gm6365-201ENSMUST00000054711 744 ntBASIC11.52□□□□□ -0.57
Mrpl55Q9CZ83 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mrpl55Q9CZ83 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC11.52□□□□□ -0.57
Mrpl55Q9CZ83 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mrpl55Q9CZ83 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mrpl55Q9CZ83 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Mrpl55Q9CZ83 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mrpl55Q9CZ83 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mrpl55Q9CZ83 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mrpl55Q9CZ83 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mrpl55Q9CZ83 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mrpl55Q9CZ83 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mrpl55Q9CZ83 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mrpl55Q9CZ83 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Mrpl55Q9CZ83 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mrpl55Q9CZ83 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mrpl55Q9CZ83 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Nespas-201ENSMUST00000143738 1083 ntBASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl55Q9CZ83 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Gm15743-202ENSMUST00000182690 1901 ntBASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms