Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx58Q6Q899 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ddx58Q6Q899 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
Ddx58Q6Q899 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx58Q6Q899 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx58Q6Q899 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC21.63■■□□□ 1.05
Ddx58Q6Q899 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.63■■□□□ 1.05
Ddx58Q6Q899 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.63■■□□□ 1.05
Ddx58Q6Q899 Gm7370-201ENSMUST00000219471 767 ntBASIC21.63■■□□□ 1.05
Ddx58Q6Q899 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx58Q6Q899 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.63■■□□□ 1.05
Ddx58Q6Q899 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx58Q6Q899 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ddx58Q6Q899 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx58Q6Q899 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx58Q6Q899 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx58Q6Q899 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.62■■□□□ 1.05
Ddx58Q6Q899 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx58Q6Q899 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Ddx58Q6Q899 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
Ddx58Q6Q899 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx58Q6Q899 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx58Q6Q899 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx58Q6Q899 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx58Q6Q899 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx58Q6Q899 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx58Q6Q899 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx58Q6Q899 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx58Q6Q899 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx58Q6Q899 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx58Q6Q899 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx58Q6Q899 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx58Q6Q899 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx58Q6Q899 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx58Q6Q899 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.61■■□□□ 1.05
Ddx58Q6Q899 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx58Q6Q899 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx58Q6Q899 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
Ddx58Q6Q899 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx58Q6Q899 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ddx58Q6Q899 Gm22697-201ENSMUST00000175194 63 ntBASIC21.61■■□□□ 1.05
Ddx58Q6Q899 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC21.61■■□□□ 1.05
Ddx58Q6Q899 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx58Q6Q899 Gm18101-201ENSMUST00000215769 548 ntBASIC21.61■■□□□ 1.05
Ddx58Q6Q899 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx58Q6Q899 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.61■■□□□ 1.05
Ddx58Q6Q899 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx58Q6Q899 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx58Q6Q899 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx58Q6Q899 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx58Q6Q899 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx58Q6Q899 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx58Q6Q899 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC21.61■■□□□ 1.05
Ddx58Q6Q899 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx58Q6Q899 Gm19721-201ENSMUST00000195284 1764 ntBASIC21.61■■□□□ 1.05
Ddx58Q6Q899 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx58Q6Q899 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
Ddx58Q6Q899 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx58Q6Q899 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx58Q6Q899 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx58Q6Q899 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx58Q6Q899 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Ddx58Q6Q899 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Ddx58Q6Q899 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx58Q6Q899 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx58Q6Q899 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx58Q6Q899 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx58Q6Q899 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx58Q6Q899 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx58Q6Q899 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx58Q6Q899 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx58Q6Q899 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx58Q6Q899 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx58Q6Q899 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx58Q6Q899 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx58Q6Q899 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx58Q6Q899 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx58Q6Q899 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Ddx58Q6Q899 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx58Q6Q899 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx58Q6Q899 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx58Q6Q899 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx58Q6Q899 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx58Q6Q899 Gm23634-201ENSMUST00000175071 91 ntBASIC21.58■■□□□ 1.05
Ddx58Q6Q899 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Ddx58Q6Q899 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx58Q6Q899 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx58Q6Q899 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx58Q6Q899 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ddx58Q6Q899 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.58■■□□□ 1.04
Ddx58Q6Q899 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.58■■□□□ 1.04
Ddx58Q6Q899 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx58Q6Q899 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Ddx58Q6Q899 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx58Q6Q899 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC21.57■■□□□ 1.04
Ddx58Q6Q899 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.57■■□□□ 1.04
Ddx58Q6Q899 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC21.57■■□□□ 1.04
Ddx58Q6Q899 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Ddx58Q6Q899 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx58Q6Q899 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms