Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S1P61966 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S1P61966 AL390719.1-204ENST00000412397 1219 ntBASIC20.32■□□□□ 0.84
AP1S1P61966 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.32■□□□□ 0.84
AP1S1P61966 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S1P61966 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S1P61966 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.32■□□□□ 0.84
AP1S1P61966 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S1P61966 AC005829.2-201ENST00000571422 1056 ntBASIC20.32■□□□□ 0.84
AP1S1P61966 AL031963.3-201ENST00000606441 850 ntBASIC20.32■□□□□ 0.84
AP1S1P61966 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S1P61966 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S1P61966 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S1P61966 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S1P61966 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.32■□□□□ 0.84
AP1S1P61966 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.32■□□□□ 0.84
AP1S1P61966 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S1P61966 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S1P61966 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP1S1P61966 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
AP1S1P61966 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
AP1S1P61966 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP1S1P61966 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP1S1P61966 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
AP1S1P61966 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP1S1P61966 HLA-G-202ENST00000376815 851 ntBASIC20.31■□□□□ 0.84
AP1S1P61966 HLA-G-203ENST00000376818 1127 ntBASIC20.31■□□□□ 0.84
AP1S1P61966 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.31■□□□□ 0.84
AP1S1P61966 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.31■□□□□ 0.84
AP1S1P61966 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.31■□□□□ 0.84
AP1S1P61966 UNC93B5-201ENST00000530315 699 ntBASIC20.31■□□□□ 0.84
AP1S1P61966 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
AP1S1P61966 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.31■□□□□ 0.84
AP1S1P61966 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP1S1P61966 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP1S1P61966 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP1S1P61966 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
AP1S1P61966 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
AP1S1P61966 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.31■□□□□ 0.84
AP1S1P61966 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP1S1P61966 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.31■□□□□ 0.84
AP1S1P61966 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.3■□□□□ 0.84
AP1S1P61966 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.3■□□□□ 0.84
AP1S1P61966 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.3■□□□□ 0.84
AP1S1P61966 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
AP1S1P61966 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP1S1P61966 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP1S1P61966 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.3■□□□□ 0.84
AP1S1P61966 KRT8P20-201ENST00000423953 1409 ntBASIC20.3■□□□□ 0.84
AP1S1P61966 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP1S1P61966 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
AP1S1P61966 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP1S1P61966 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.3■□□□□ 0.84
AP1S1P61966 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.3■□□□□ 0.84
AP1S1P61966 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.3■□□□□ 0.84
AP1S1P61966 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.3■□□□□ 0.84
AP1S1P61966 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.3■□□□□ 0.84
AP1S1P61966 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.3■□□□□ 0.84
AP1S1P61966 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
AP1S1P61966 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
AP1S1P61966 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
AP1S1P61966 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP1S1P61966 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP1S1P61966 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
AP1S1P61966 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
AP1S1P61966 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP1S1P61966 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP1S1P61966 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.29■□□□□ 0.84
AP1S1P61966 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
AP1S1P61966 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP1S1P61966 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
AP1S1P61966 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.29■□□□□ 0.84
AP1S1P61966 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP1S1P61966 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
AP1S1P61966 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.29■□□□□ 0.84
AP1S1P61966 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.29■□□□□ 0.84
AP1S1P61966 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
AP1S1P61966 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP1S1P61966 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
AP1S1P61966 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
AP1S1P61966 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP1S1P61966 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
AP1S1P61966 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP1S1P61966 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.29■□□□□ 0.84
AP1S1P61966 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.28■□□□□ 0.84
AP1S1P61966 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
AP1S1P61966 KRT8P17-201ENST00000453110 1448 ntBASIC20.28■□□□□ 0.84
AP1S1P61966 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.28■□□□□ 0.84
AP1S1P61966 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
AP1S1P61966 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP1S1P61966 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP1S1P61966 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.28■□□□□ 0.84
AP1S1P61966 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.28■□□□□ 0.84
AP1S1P61966 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
AP1S1P61966 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.28■□□□□ 0.84
AP1S1P61966 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.28■□□□□ 0.84
AP1S1P61966 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.28■□□□□ 0.84
AP1S1P61966 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
AP1S1P61966 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP1S1P61966 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms