Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stx1aO35526 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stx1aO35526 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stx1aO35526 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Stx1aO35526 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stx1aO35526 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stx1aO35526 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stx1aO35526 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stx1aO35526 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Stx1aO35526 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.67■□□□□ 0.74
Stx1aO35526 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Stx1aO35526 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Stx1aO35526 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Stx1aO35526 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Stx1aO35526 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Stx1aO35526 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Stx1aO35526 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.67■□□□□ 0.74
Stx1aO35526 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.67■□□□□ 0.74
Stx1aO35526 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Stx1aO35526 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Stx1aO35526 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Stx1aO35526 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Stx1aO35526 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Stx1aO35526 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Stx1aO35526 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Stx1aO35526 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Stx1aO35526 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Stx1aO35526 Gm10033-202ENSMUST00000211874 928 ntBASIC19.66■□□□□ 0.74
Stx1aO35526 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Stx1aO35526 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Stx1aO35526 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.66■□□□□ 0.74
Stx1aO35526 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Stx1aO35526 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Stx1aO35526 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Stx1aO35526 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Stx1aO35526 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Stx1aO35526 Gm10418-201ENSMUST00000100943 576 ntBASIC19.65■□□□□ 0.74
Stx1aO35526 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stx1aO35526 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Stx1aO35526 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.65■□□□□ 0.74
Stx1aO35526 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stx1aO35526 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.65■□□□□ 0.74
Stx1aO35526 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stx1aO35526 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Stx1aO35526 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stx1aO35526 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stx1aO35526 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Stx1aO35526 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stx1aO35526 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stx1aO35526 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stx1aO35526 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Stx1aO35526 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stx1aO35526 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stx1aO35526 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Stx1aO35526 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Stx1aO35526 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.64■□□□□ 0.74
Stx1aO35526 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stx1aO35526 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stx1aO35526 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Stx1aO35526 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Stx1aO35526 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stx1aO35526 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Stx1aO35526 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stx1aO35526 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stx1aO35526 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stx1aO35526 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Stx1aO35526 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Stx1aO35526 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stx1aO35526 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stx1aO35526 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.64■□□□□ 0.73
Stx1aO35526 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stx1aO35526 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stx1aO35526 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stx1aO35526 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stx1aO35526 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stx1aO35526 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stx1aO35526 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stx1aO35526 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stx1aO35526 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.63■□□□□ 0.73
Stx1aO35526 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
Stx1aO35526 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stx1aO35526 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Stx1aO35526 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stx1aO35526 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stx1aO35526 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stx1aO35526 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stx1aO35526 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stx1aO35526 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Stx1aO35526 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stx1aO35526 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Stx1aO35526 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Stx1aO35526 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.62■□□□□ 0.73
Stx1aO35526 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.62■□□□□ 0.73
Stx1aO35526 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.62■□□□□ 0.73
Stx1aO35526 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Stx1aO35526 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stx1aO35526 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stx1aO35526 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stx1aO35526 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stx1aO35526 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms