Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdr1E9Q0B4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdr1E9Q0B4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdr1E9Q0B4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdr1E9Q0B4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdr1E9Q0B4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdr1E9Q0B4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdr1E9Q0B4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdr1E9Q0B4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdr1E9Q0B4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.29■□□□□ 0.36
Cdr1E9Q0B4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.29■□□□□ 0.36
Cdr1E9Q0B4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cdr1E9Q0B4 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.29■□□□□ 0.36
Cdr1E9Q0B4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdr1E9Q0B4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdr1E9Q0B4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdr1E9Q0B4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdr1E9Q0B4 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Cdr1E9Q0B4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdr1E9Q0B4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdr1E9Q0B4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdr1E9Q0B4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdr1E9Q0B4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdr1E9Q0B4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cdr1E9Q0B4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdr1E9Q0B4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.28■□□□□ 0.36
Cdr1E9Q0B4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cdr1E9Q0B4 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.28■□□□□ 0.36
Cdr1E9Q0B4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdr1E9Q0B4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.28■□□□□ 0.36
Cdr1E9Q0B4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cdr1E9Q0B4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdr1E9Q0B4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdr1E9Q0B4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdr1E9Q0B4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdr1E9Q0B4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cdr1E9Q0B4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdr1E9Q0B4 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cdr1E9Q0B4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdr1E9Q0B4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Cdr1E9Q0B4 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdr1E9Q0B4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdr1E9Q0B4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdr1E9Q0B4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdr1E9Q0B4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.27■□□□□ 0.36
Cdr1E9Q0B4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdr1E9Q0B4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdr1E9Q0B4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdr1E9Q0B4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.27■□□□□ 0.36
Cdr1E9Q0B4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdr1E9Q0B4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdr1E9Q0B4 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.27■□□□□ 0.35
Cdr1E9Q0B4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdr1E9Q0B4 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.26■□□□□ 0.35
Cdr1E9Q0B4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdr1E9Q0B4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cdr1E9Q0B4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdr1E9Q0B4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cdr1E9Q0B4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdr1E9Q0B4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdr1E9Q0B4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdr1E9Q0B4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.26■□□□□ 0.35
Cdr1E9Q0B4 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdr1E9Q0B4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdr1E9Q0B4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdr1E9Q0B4 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.26■□□□□ 0.35
Cdr1E9Q0B4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdr1E9Q0B4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdr1E9Q0B4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdr1E9Q0B4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdr1E9Q0B4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdr1E9Q0B4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.26■□□□□ 0.35
Cdr1E9Q0B4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdr1E9Q0B4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cdr1E9Q0B4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdr1E9Q0B4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdr1E9Q0B4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms