Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-1A0A0G2JEU8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.66□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-1A0A0G2JEU8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.66□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Gm15375-201ENSMUST00000119510 849 ntBASIC12.66□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.66□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Gm9194-201ENSMUST00000220749 1447 ntBASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Mir1199-201ENSMUST00000117015 119 ntBASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav13n-1A0A0G2JEU8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm715-201ENSMUST00000117865 831 ntBASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms