Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SNORA72.1-201ENST00000363485 129 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 AC073263.1-202ENST00000401851 924 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 PGBD4P8-201ENST00000412993 562 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 NPM1P4-201ENST00000414095 812 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC10□□□□□ -0.81
LRCH3Q96II8 B3GNT2P1-201ENST00000434960 952 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 AL035417.1-201ENST00000442754 214 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 AC023271.1-201ENST00000445936 1090 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 AC093392.2-201ENST00000450682 337 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 C1DP3-201ENST00000455013 423 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC10□□□□□ -0.81
LRCH3Q96II8 AC069304.1-201ENST00000491593 704 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 RN7SL792P-201ENST00000496286 305 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC10□□□□□ -0.81
LRCH3Q96II8 CBX3P3-201ENST00000508108 532 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 LEF1-AS1-205ENST00000508286 444 ntTSL 2 BASIC10□□□□□ -0.81
LRCH3Q96II8 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC10□□□□□ -0.81
LRCH3Q96II8 AC008885.2-201ENST00000509506 930 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 RNU6-507P-201ENST00000516045 100 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 RNU6-875P-201ENST00000516488 106 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 AC124290.2-201ENST00000519431 286 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC10□□□□□ -0.81
LRCH3Q96II8 AC135983.3-201ENST00000528049 1226 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 AP001767.3-201ENST00000533329 436 ntTSL 5 BASIC10□□□□□ -0.81
LRCH3Q96II8 AC019209.1-201ENST00000544399 486 ntTSL 2 BASIC10□□□□□ -0.81
LRCH3Q96II8 DUOXA1-215ENST00000560572 1044 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC10□□□□□ -0.81
LRCH3Q96II8 FRG2GP-201ENST00000567870 615 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 AC002400.1-201ENST00000569310 726 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC10□□□□□ -0.81
LRCH3Q96II8 LINC02132-201ENST00000598933 750 ntTSL 2 BASIC10□□□□□ -0.81
LRCH3Q96II8 AP000907.4-201ENST00000604143 237 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 AC106791.2-201ENST00000604680 391 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 AC018618.2-201ENST00000604770 446 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 AP003392.5-201ENST00000607857 415 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 MIR6892-201ENST00000612346 115 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 AC009053.4-201ENST00000614366 108 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 ACSM3-202ENST00000440284 1517 ntTSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 IFIT3-201ENST00000371811 2455 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 STAU1-206ENST00000371828 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 BLNK-201ENST00000224337 1784 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 DBF4B-201ENST00000315005 2997 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 LINC01498-201ENST00000502160 2984 ntTSL 5 BASIC10□□□□□ -0.81
LRCH3Q96II8 ZFYVE26-201ENST00000347230 9675 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 BTN3A3-202ENST00000361232 2294 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
LRCH3Q96II8 MELK-206ENST00000536329 2283 ntTSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 AC100756.3-201ENST00000618455 1816 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 CYFIP1-203ENST00000610365 4515 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 MFSD8-256ENST00000641949 1640 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 SS18-203ENST00000415083 3414 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 LIN54-202ENST00000442461 4254 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LRCH3Q96II8 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LRCH3Q96II8 PPM1L-202ENST00000464260 2735 ntTSL 2 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 TP53BP1-210ENST00000450115 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
LRCH3Q96II8 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LRCH3Q96II8 NIPAL3-201ENST00000003912 5481 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LRCH3Q96II8 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LRCH3Q96II8 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LRCH3Q96II8 ZNF736-201ENST00000355095 2098 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 BDKRB2-203ENST00000554311 4040 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LRCH3Q96II8 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 FBN2-204ENST00000508053 11132 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 ALPK1-205ENST00000504176 5203 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 OR3A3-201ENST00000291231 966 ntBASIC9.99□□□□□ -0.81
LRCH3Q96II8 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 CYP2AC1P-201ENST00000407830 1173 ntBASIC9.99□□□□□ -0.81
LRCH3Q96II8 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 UBE2V1P8-201ENST00000437166 265 ntBASIC9.99□□□□□ -0.81
LRCH3Q96II8 NANOGNBP1-201ENST00000448444 480 ntBASIC9.99□□□□□ -0.81
LRCH3Q96II8 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LRCH3Q96II8 RPS6P2-201ENST00000454208 705 ntBASIC9.99□□□□□ -0.81
LRCH3Q96II8 AL662890.2-201ENST00000457253 709 ntTSL 3 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 PFN2-213ENST00000494827 793 ntTSL 4 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 AC092045.1-201ENST00000495716 1231 ntBASIC9.99□□□□□ -0.81
LRCH3Q96II8 NIPA2P2-201ENST00000496376 1083 ntBASIC9.99□□□□□ -0.81
LRCH3Q96II8 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 AC073848.1-201ENST00000514339 457 ntTSL 3 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 AC027698.1-201ENST00000518536 625 ntTSL 3 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 NDUFA5P2-201ENST00000519723 344 ntBASIC9.99□□□□□ -0.81
LRCH3Q96II8 OR7E10P-201ENST00000526420 991 ntBASIC9.99□□□□□ -0.81
LRCH3Q96II8 AP000873.5-201ENST00000533906 236 ntBASIC9.99□□□□□ -0.81
LRCH3Q96II8 AC013391.1-201ENST00000560477 459 ntTSL 3 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 OR3A3-202ENST00000574571 966 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 AL157931.1-201ENST00000575845 585 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LRCH3Q96II8 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 MIR3159-201ENST00000584572 74 ntBASIC9.99□□□□□ -0.81
LRCH3Q96II8 AC015961.1-201ENST00000589715 2124 ntBASIC9.99□□□□□ -0.81
LRCH3Q96II8 AC003098.1-201ENST00000591540 494 ntTSL 3 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 AC123912.1-201ENST00000594564 447 ntTSL 3 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 CLEC4M-209ENST00000596707 999 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
LRCH3Q96II8 VN1R82P-201ENST00000601481 356 ntBASIC9.99□□□□□ -0.81
LRCH3Q96II8 AC024451.4-201ENST00000602578 752 ntBASIC9.99□□□□□ -0.81
LRCH3Q96II8 PACERR-201ENST00000608917 825 ntBASIC9.99□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 186.5 ms