Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RPL23AP66-201ENST00000494341 479 ntBASIC7.44□□□□□ -1.22
SNX18Q96RF0 AC244505.1-201ENST00000502642 307 ntBASIC7.44□□□□□ -1.22
SNX18Q96RF0 AC025465.1-201ENST00000503145 797 ntTSL 3 BASIC7.44□□□□□ -1.22
SNX18Q96RF0 UGT2B29P-201ENST00000509021 973 ntBASIC7.44□□□□□ -1.22
SNX18Q96RF0 AC084251.1-201ENST00000521867 382 ntBASIC7.44□□□□□ -1.22
SNX18Q96RF0 IMPA1P1-202ENST00000522318 332 ntTSL 2 BASIC7.44□□□□□ -1.22
SNX18Q96RF0 AC023644.1-201ENST00000523380 859 ntTSL 5 BASIC7.44□□□□□ -1.22
SNX18Q96RF0 LINC01490-201ENST00000548705 638 ntTSL 3 BASIC7.44□□□□□ -1.22
SNX18Q96RF0 AC084033.2-201ENST00000551532 967 ntBASIC7.44□□□□□ -1.22
SNX18Q96RF0 LINC02295-201ENST00000557072 374 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SNX18Q96RF0 AL157931.1-201ENST00000575845 585 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SNX18Q96RF0 AC115989.2-201ENST00000578640 563 ntBASIC7.44□□□□□ -1.22
SNX18Q96RF0 AC011523.1-201ENST00000598079 392 ntTSL 3 BASIC7.44□□□□□ -1.22
SNX18Q96RF0 BNIP3P17-201ENST00000605448 595 ntBASIC7.44□□□□□ -1.22
SNX18Q96RF0 AC002059.1-201ENST00000608014 477 ntBASIC7.44□□□□□ -1.22
SNX18Q96RF0 MIR6505-201ENST00000617206 71 ntBASIC7.44□□□□□ -1.22
SNX18Q96RF0 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SNX18Q96RF0 CSTL1-205ENST00000619238 477 ntTSL 5 BASIC7.44□□□□□ -1.22
SNX18Q96RF0 Metazoa_SRP.115-201ENST00000619303 284 ntBASIC7.44□□□□□ -1.22
SNX18Q96RF0 MIR6754-201ENST00000621121 66 ntBASIC7.44□□□□□ -1.22
SNX18Q96RF0 AC126474.1-201ENST00000623555 1293 ntBASIC7.44□□□□□ -1.22
SNX18Q96RF0 CU638689.2-201ENST00000623809 818 ntBASIC7.44□□□□□ -1.22
SNX18Q96RF0 AC010533.1-201ENST00000624875 2105 ntBASIC7.44□□□□□ -1.22
SNX18Q96RF0 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
SNX18Q96RF0 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.44□□□□□ -1.22
SNX18Q96RF0 STXBP6-207ENST00000550887 1311 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
SNX18Q96RF0 ZMIZ1-AS1-201ENST00000428862 2851 ntTSL 5 BASIC7.44□□□□□ -1.22
SNX18Q96RF0 SEPT4-211ENST00000579371 1362 ntTSL 5 BASIC7.44□□□□□ -1.22
SNX18Q96RF0 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SNX18Q96RF0 PSG9-209ENST00000621109 2019 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
SNX18Q96RF0 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC7.44□□□□□ -1.22
SNX18Q96RF0 AL008638.2-201ENST00000453934 2383 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SNX18Q96RF0 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.43□□□□□ -1.22
SNX18Q96RF0 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC7.43□□□□□ -1.22
SNX18Q96RF0 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 FMO9P-202ENST00000488458 1535 ntBASIC7.43□□□□□ -1.22
SNX18Q96RF0 UGT2B28-202ENST00000511240 1525 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 TRIM51EP-201ENST00000524374 1516 ntBASIC7.43□□□□□ -1.22
SNX18Q96RF0 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 OR8B9P-202ENST00000642028 5216 ntBASIC7.43□□□□□ -1.22
SNX18Q96RF0 CEP57L1-202ENST00000368968 1649 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
SNX18Q96RF0 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC7.43□□□□□ -1.22
SNX18Q96RF0 TRBV7-5-201ENST00000390382 345 ntBASIC7.43□□□□□ -1.22
SNX18Q96RF0 RN7SKP136-201ENST00000410927 300 ntBASIC7.43□□□□□ -1.22
SNX18Q96RF0 AL671986.1-201ENST00000422197 955 ntBASIC7.43□□□□□ -1.22
SNX18Q96RF0 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 WRBP1-201ENST00000423352 334 ntBASIC7.43□□□□□ -1.22
SNX18Q96RF0 AC132217.1-201ENST00000430034 373 ntTSL 3 BASIC7.43□□□□□ -1.22
SNX18Q96RF0 LINC01827-201ENST00000432711 555 ntTSL 2 BASIC7.43□□□□□ -1.22
SNX18Q96RF0 BACE2-IT1-201ENST00000433378 382 ntTSL 5 BASIC7.43□□□□□ -1.22
SNX18Q96RF0 ASS1P4-201ENST00000439462 1234 ntBASIC7.43□□□□□ -1.22
SNX18Q96RF0 AL391987.3-201ENST00000441101 719 ntTSL 5 BASIC7.43□□□□□ -1.22
SNX18Q96RF0 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
SNX18Q96RF0 DISC1-IT1-201ENST00000456782 762 ntTSL 3 BASIC7.43□□□□□ -1.22
SNX18Q96RF0 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC7.43□□□□□ -1.22
SNX18Q96RF0 LINC01331-201ENST00000507781 568 ntTSL 4 BASIC7.43□□□□□ -1.22
SNX18Q96RF0 AC117498.2-202ENST00000549864 473 ntTSL 2 BASIC7.43□□□□□ -1.22
SNX18Q96RF0 VWA3A-205ENST00000563755 861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 LINC00969-233ENST00000597871 839 ntTSL 5 BASIC7.43□□□□□ -1.22
SNX18Q96RF0 AL158151.4-201ENST00000600965 507 ntBASIC7.43□□□□□ -1.22
SNX18Q96RF0 AC008957.2-201ENST00000618632 396 ntTSL 5 BASIC7.43□□□□□ -1.22
SNX18Q96RF0 AL360169.2-201ENST00000619713 561 ntTSL 5 BASIC7.43□□□□□ -1.22
SNX18Q96RF0 ST13-207ENST00000620312 944 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 ELK3-201ENST00000228741 4205 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.43□□□□□ -1.22
SNX18Q96RF0 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.43□□□□□ -1.22
SNX18Q96RF0 AC127024.8-201ENST00000623719 2094 ntBASIC7.43□□□□□ -1.22
SNX18Q96RF0 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC7.43□□□□□ -1.22
SNX18Q96RF0 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC7.43□□□□□ -1.22
SNX18Q96RF0 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.43□□□□□ -1.22
SNX18Q96RF0 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 RN7SKP23-201ENST00000625159 4301 ntBASIC7.43□□□□□ -1.22
SNX18Q96RF0 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 RBMS3-203ENST00000383767 1864 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 WASF4P-201ENST00000444248 1494 ntBASIC7.43□□□□□ -1.22
SNX18Q96RF0 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SNX18Q96RF0 AC008555.1-201ENST00000561778 2757 ntBASIC7.42□□□□□ -1.22
SNX18Q96RF0 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SNX18Q96RF0 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 LINC01725-205ENST00000457273 1991 ntTSL 2 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SNX18Q96RF0 MSANTD3-TMEFF1-201ENST00000502978 2069 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
SNX18Q96RF0 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SNX18Q96RF0 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
SNX18Q96RF0 ZNF701-201ENST00000301093 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
SNX18Q96RF0 SLC8A1-203ENST00000403092 3178 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms