Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.85■□□□□ 0.29
Ap4s1Q9WVL1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ap4s1Q9WVL1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
Ap4s1Q9WVL1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ap4s1Q9WVL1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ap4s1Q9WVL1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ap4s1Q9WVL1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ap4s1Q9WVL1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ap4s1Q9WVL1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.84■□□□□ 0.29
Ap4s1Q9WVL1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ap4s1Q9WVL1 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.84■□□□□ 0.29
Ap4s1Q9WVL1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Ap4s1Q9WVL1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ap4s1Q9WVL1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ap4s1Q9WVL1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ap4s1Q9WVL1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ap4s1Q9WVL1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ap4s1Q9WVL1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ap4s1Q9WVL1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ap4s1Q9WVL1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ap4s1Q9WVL1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ap4s1Q9WVL1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ap4s1Q9WVL1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ap4s1Q9WVL1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ap4s1Q9WVL1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ap4s1Q9WVL1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ap4s1Q9WVL1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Ap4s1Q9WVL1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ap4s1Q9WVL1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ap4s1Q9WVL1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
Ap4s1Q9WVL1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ap4s1Q9WVL1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ap4s1Q9WVL1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ap4s1Q9WVL1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ap4s1Q9WVL1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ap4s1Q9WVL1 Gm8493-201ENSMUST00000196881 489 ntBASIC16.83■□□□□ 0.28
Ap4s1Q9WVL1 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.83■□□□□ 0.28
Ap4s1Q9WVL1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.83■□□□□ 0.28
Ap4s1Q9WVL1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ap4s1Q9WVL1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ap4s1Q9WVL1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ap4s1Q9WVL1 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.83■□□□□ 0.28
Ap4s1Q9WVL1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ap4s1Q9WVL1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Ap4s1Q9WVL1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ap4s1Q9WVL1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap4s1Q9WVL1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap4s1Q9WVL1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap4s1Q9WVL1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap4s1Q9WVL1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap4s1Q9WVL1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap4s1Q9WVL1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap4s1Q9WVL1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap4s1Q9WVL1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap4s1Q9WVL1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap4s1Q9WVL1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.82■□□□□ 0.28
Ap4s1Q9WVL1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ap4s1Q9WVL1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap4s1Q9WVL1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ap4s1Q9WVL1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap4s1Q9WVL1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap4s1Q9WVL1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap4s1Q9WVL1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap4s1Q9WVL1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap4s1Q9WVL1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ap4s1Q9WVL1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ap4s1Q9WVL1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ap4s1Q9WVL1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ap4s1Q9WVL1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ap4s1Q9WVL1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ap4s1Q9WVL1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.81■□□□□ 0.28
Ap4s1Q9WVL1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ap4s1Q9WVL1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ap4s1Q9WVL1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Ap4s1Q9WVL1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ap4s1Q9WVL1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ap4s1Q9WVL1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ap4s1Q9WVL1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ap4s1Q9WVL1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ap4s1Q9WVL1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ap4s1Q9WVL1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ap4s1Q9WVL1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Ap4s1Q9WVL1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ap4s1Q9WVL1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Ap4s1Q9WVL1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ap4s1Q9WVL1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ap4s1Q9WVL1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ap4s1Q9WVL1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ap4s1Q9WVL1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ap4s1Q9WVL1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ap4s1Q9WVL1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ap4s1Q9WVL1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ap4s1Q9WVL1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ap4s1Q9WVL1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ap4s1Q9WVL1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.79■□□□□ 0.28
Ap4s1Q9WVL1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.79■□□□□ 0.28
Ap4s1Q9WVL1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ap4s1Q9WVL1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Ap4s1Q9WVL1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ap4s1Q9WVL1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms