Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CDX2Q99626 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.41■■□□□ 1.02
CDX2Q99626 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.41■■□□□ 1.02
CDX2Q99626 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDX2Q99626 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDX2Q99626 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDX2Q99626 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDX2Q99626 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDX2Q99626 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDX2Q99626 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDX2Q99626 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDX2Q99626 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.4■■□□□ 1.02
CDX2Q99626 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.4■■□□□ 1.02
CDX2Q99626 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.4■■□□□ 1.02
CDX2Q99626 AC069148.1-201ENST00000608741 768 ntBASIC21.4■■□□□ 1.02
CDX2Q99626 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.4■■□□□ 1.02
CDX2Q99626 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDX2Q99626 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.4■■□□□ 1.02
CDX2Q99626 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.39■■□□□ 1.02
CDX2Q99626 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.39■■□□□ 1.02
CDX2Q99626 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.39■■□□□ 1.01
CDX2Q99626 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDX2Q99626 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.39■■□□□ 1.01
CDX2Q99626 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.39■■□□□ 1.01
CDX2Q99626 COX11P1-201ENST00000489116 835 ntBASIC21.39■■□□□ 1.01
CDX2Q99626 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.39■■□□□ 1.01
CDX2Q99626 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.39■■□□□ 1.01
CDX2Q99626 AC004263.2-201ENST00000617183 678 ntBASIC21.39■■□□□ 1.01
CDX2Q99626 AC116407.4-201ENST00000623319 1061 ntBASIC21.39■■□□□ 1.01
CDX2Q99626 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.38■■□□□ 1.01
CDX2Q99626 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.38■■□□□ 1.01
CDX2Q99626 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.38■■□□□ 1.01
CDX2Q99626 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDX2Q99626 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDX2Q99626 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDX2Q99626 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDX2Q99626 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.38■■□□□ 1.01
CDX2Q99626 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.38■■□□□ 1.01
CDX2Q99626 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDX2Q99626 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.38■■□□□ 1.01
CDX2Q99626 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CDX2Q99626 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDX2Q99626 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
CDX2Q99626 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.38■■□□□ 1.01
CDX2Q99626 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CDX2Q99626 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDX2Q99626 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDX2Q99626 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.37■■□□□ 1.01
CDX2Q99626 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDX2Q99626 AC005332.1-201ENST00000577698 1310 ntBASIC21.37■■□□□ 1.01
CDX2Q99626 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.37■■□□□ 1.01
CDX2Q99626 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDX2Q99626 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.37■■□□□ 1.01
CDX2Q99626 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.37■■□□□ 1.01
CDX2Q99626 AC097488.1-201ENST00000507834 756 ntBASIC21.37■■□□□ 1.01
CDX2Q99626 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CDX2Q99626 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.37■■□□□ 1.01
CDX2Q99626 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.37■■□□□ 1.01
CDX2Q99626 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.37■■□□□ 1.01
CDX2Q99626 DGCR10-201ENST00000609839 495 ntBASIC21.37■■□□□ 1.01
CDX2Q99626 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.37■■□□□ 1.01
CDX2Q99626 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDX2Q99626 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDX2Q99626 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.37■■□□□ 1.01
CDX2Q99626 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDX2Q99626 AC068473.5-201ENST00000616428 2072 ntBASIC21.36■■□□□ 1.01
CDX2Q99626 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CDX2Q99626 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
CDX2Q99626 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDX2Q99626 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDX2Q99626 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDX2Q99626 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.36■■□□□ 1.01
CDX2Q99626 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.36■■□□□ 1.01
CDX2Q99626 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.36■■□□□ 1.01
CDX2Q99626 AC011558.1-201ENST00000623459 338 ntBASIC21.36■■□□□ 1.01
CDX2Q99626 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDX2Q99626 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDX2Q99626 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDX2Q99626 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDX2Q99626 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDX2Q99626 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.35■■□□□ 1.01
CDX2Q99626 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.35■■□□□ 1.01
CDX2Q99626 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.35■■□□□ 1.01
CDX2Q99626 SLC25A1P4-201ENST00000567977 778 ntBASIC21.35■■□□□ 1.01
CDX2Q99626 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
CDX2Q99626 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.35■■□□□ 1.01
CDX2Q99626 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.35■■□□□ 1.01
CDX2Q99626 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.35■■□□□ 1.01
CDX2Q99626 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.35■■□□□ 1.01
CDX2Q99626 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.35■■□□□ 1.01
CDX2Q99626 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.35■■□□□ 1.01
CDX2Q99626 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDX2Q99626 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDX2Q99626 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDX2Q99626 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDX2Q99626 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.34■■□□□ 1.01
CDX2Q99626 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDX2Q99626 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CDX2Q99626 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.34■■□□□ 1.01
CDX2Q99626 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms