Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
ZNF558Q96NG5 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF558Q96NG5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.59■■□□□ 1.05
ZNF558Q96NG5 AL353807.1-201ENST00000427475 662 ntBASIC21.59■■□□□ 1.05
ZNF558Q96NG5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF558Q96NG5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.59■■□□□ 1.05
ZNF558Q96NG5 AF186192.3-201ENST00000583427 947 ntBASIC21.59■■□□□ 1.05
ZNF558Q96NG5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.59■■□□□ 1.05
ZNF558Q96NG5 AL121906.2-201ENST00000621597 723 ntBASIC21.59■■□□□ 1.05
ZNF558Q96NG5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF558Q96NG5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF558Q96NG5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
ZNF558Q96NG5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF558Q96NG5 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
ZNF558Q96NG5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF558Q96NG5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF558Q96NG5 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF558Q96NG5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF558Q96NG5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF558Q96NG5 AL355355.2-201ENST00000442321 338 ntBASIC21.58■■□□□ 1.05
ZNF558Q96NG5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
ZNF558Q96NG5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.58■■□□□ 1.05
ZNF558Q96NG5 AP003071.4-201ENST00000562276 1284 ntBASIC21.58■■□□□ 1.05
ZNF558Q96NG5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
ZNF558Q96NG5 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
ZNF558Q96NG5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
ZNF558Q96NG5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ZNF558Q96NG5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.58■■□□□ 1.04
ZNF558Q96NG5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ZNF558Q96NG5 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
ZNF558Q96NG5 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
ZNF558Q96NG5 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF558Q96NG5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF558Q96NG5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF558Q96NG5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF558Q96NG5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF558Q96NG5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF558Q96NG5 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.57■■□□□ 1.04
ZNF558Q96NG5 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
ZNF558Q96NG5 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.57■■□□□ 1.04
ZNF558Q96NG5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.57■■□□□ 1.04
ZNF558Q96NG5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.57■■□□□ 1.04
ZNF558Q96NG5 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
ZNF558Q96NG5 AC097493.4-201ENST00000641197 219 ntBASIC21.57■■□□□ 1.04
ZNF558Q96NG5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF558Q96NG5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.57■■□□□ 1.04
ZNF558Q96NG5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF558Q96NG5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF558Q96NG5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ZNF558Q96NG5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF558Q96NG5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF558Q96NG5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
ZNF558Q96NG5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF558Q96NG5 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.56■■□□□ 1.04
ZNF558Q96NG5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.56■■□□□ 1.04
ZNF558Q96NG5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.56■■□□□ 1.04
ZNF558Q96NG5 CD177P1-201ENST00000606252 935 ntBASIC21.56■■□□□ 1.04
ZNF558Q96NG5 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF558Q96NG5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ZNF558Q96NG5 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF558Q96NG5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.56■■□□□ 1.04
ZNF558Q96NG5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF558Q96NG5 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.56■■□□□ 1.04
ZNF558Q96NG5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
ZNF558Q96NG5 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.55■■□□□ 1.04
ZNF558Q96NG5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.54■■□□□ 1.04
ZNF558Q96NG5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF558Q96NG5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF558Q96NG5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.54■■□□□ 1.04
ZNF558Q96NG5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
ZNF558Q96NG5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.54■■□□□ 1.04
ZNF558Q96NG5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms