Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx39aQ8VDW0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx39aQ8VDW0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx39aQ8VDW0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Ddx39aQ8VDW0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx39aQ8VDW0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.49■□□□□ 0.71
Ddx39aQ8VDW0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx39aQ8VDW0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.49■□□□□ 0.71
Ddx39aQ8VDW0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx39aQ8VDW0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ddx39aQ8VDW0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx39aQ8VDW0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx39aQ8VDW0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx39aQ8VDW0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx39aQ8VDW0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ddx39aQ8VDW0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx39aQ8VDW0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ddx39aQ8VDW0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx39aQ8VDW0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx39aQ8VDW0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx39aQ8VDW0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx39aQ8VDW0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx39aQ8VDW0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx39aQ8VDW0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ddx39aQ8VDW0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx39aQ8VDW0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx39aQ8VDW0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx39aQ8VDW0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx39aQ8VDW0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.48■□□□□ 0.71
Ddx39aQ8VDW0 Gm2274-201ENSMUST00000184539 609 ntBASIC19.48■□□□□ 0.71
Ddx39aQ8VDW0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx39aQ8VDW0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx39aQ8VDW0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx39aQ8VDW0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.48■□□□□ 0.71
Ddx39aQ8VDW0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx39aQ8VDW0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.48■□□□□ 0.71
Ddx39aQ8VDW0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx39aQ8VDW0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx39aQ8VDW0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Ddx39aQ8VDW0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx39aQ8VDW0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx39aQ8VDW0 Gm7638-201ENSMUST00000121348 967 ntBASIC19.47■□□□□ 0.71
Ddx39aQ8VDW0 Mir5130-201ENSMUST00000175160 84 ntBASIC19.47■□□□□ 0.71
Ddx39aQ8VDW0 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.47■□□□□ 0.71
Ddx39aQ8VDW0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Ddx39aQ8VDW0 Gm45058-201ENSMUST00000205810 766 ntBASIC19.47■□□□□ 0.71
Ddx39aQ8VDW0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx39aQ8VDW0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx39aQ8VDW0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx39aQ8VDW0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx39aQ8VDW0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx39aQ8VDW0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx39aQ8VDW0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx39aQ8VDW0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx39aQ8VDW0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx39aQ8VDW0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.46■□□□□ 0.71
Ddx39aQ8VDW0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.46■□□□□ 0.71
Ddx39aQ8VDW0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx39aQ8VDW0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.46■□□□□ 0.71
Ddx39aQ8VDW0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Ddx39aQ8VDW0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx39aQ8VDW0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx39aQ8VDW0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx39aQ8VDW0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx39aQ8VDW0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx39aQ8VDW0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ddx39aQ8VDW0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx39aQ8VDW0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx39aQ8VDW0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx39aQ8VDW0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx39aQ8VDW0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx39aQ8VDW0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx39aQ8VDW0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx39aQ8VDW0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx39aQ8VDW0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx39aQ8VDW0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx39aQ8VDW0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx39aQ8VDW0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx39aQ8VDW0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ddx39aQ8VDW0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.44■□□□□ 0.7
Ddx39aQ8VDW0 Gm6659-201ENSMUST00000174752 547 ntBASIC19.44■□□□□ 0.7
Ddx39aQ8VDW0 Gm7791-201ENSMUST00000219066 539 ntBASIC19.44■□□□□ 0.7
Ddx39aQ8VDW0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Ddx39aQ8VDW0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx39aQ8VDW0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx39aQ8VDW0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx39aQ8VDW0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx39aQ8VDW0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx39aQ8VDW0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ddx39aQ8VDW0 Grk6-206ENSMUST00000224995 2971 ntBASIC19.44■□□□□ 0.7
Ddx39aQ8VDW0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx39aQ8VDW0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Ddx39aQ8VDW0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx39aQ8VDW0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx39aQ8VDW0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx39aQ8VDW0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Ddx39aQ8VDW0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx39aQ8VDW0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx39aQ8VDW0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx39aQ8VDW0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms