Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.12■□□□□ 0.97
Ccdc9Q8VC31 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ccdc9Q8VC31 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc9Q8VC31 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc9Q8VC31 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Ccdc9Q8VC31 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc9Q8VC31 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc9Q8VC31 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc9Q8VC31 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc9Q8VC31 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc9Q8VC31 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc9Q8VC31 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc9Q8VC31 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc9Q8VC31 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc9Q8VC31 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc9Q8VC31 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc9Q8VC31 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc9Q8VC31 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc9Q8VC31 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC21.11■□□□□ 0.97
Ccdc9Q8VC31 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc9Q8VC31 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc9Q8VC31 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc9Q8VC31 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.11■□□□□ 0.97
Ccdc9Q8VC31 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.11■□□□□ 0.97
Ccdc9Q8VC31 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc9Q8VC31 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC21.11■□□□□ 0.97
Ccdc9Q8VC31 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc9Q8VC31 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc9Q8VC31 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Ccdc9Q8VC31 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc9Q8VC31 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc9Q8VC31 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc9Q8VC31 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc9Q8VC31 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc9Q8VC31 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc9Q8VC31 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc9Q8VC31 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc9Q8VC31 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.1■□□□□ 0.97
Ccdc9Q8VC31 Gm12922-201ENSMUST00000120626 809 ntBASIC21.1■□□□□ 0.97
Ccdc9Q8VC31 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc9Q8VC31 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Ccdc9Q8VC31 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc9Q8VC31 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc9Q8VC31 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc9Q8VC31 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc9Q8VC31 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc9Q8VC31 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc9Q8VC31 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ccdc9Q8VC31 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc9Q8VC31 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc9Q8VC31 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc9Q8VC31 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc9Q8VC31 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.09■□□□□ 0.97
Ccdc9Q8VC31 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ccdc9Q8VC31 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc9Q8VC31 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Ccdc9Q8VC31 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc9Q8VC31 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc9Q8VC31 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ccdc9Q8VC31 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc9Q8VC31 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc9Q8VC31 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc9Q8VC31 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC21.08■□□□□ 0.97
Ccdc9Q8VC31 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc9Q8VC31 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Ccdc9Q8VC31 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc9Q8VC31 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc9Q8VC31 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc9Q8VC31 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.08■□□□□ 0.97
Ccdc9Q8VC31 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.08■□□□□ 0.97
Ccdc9Q8VC31 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC21.08■□□□□ 0.96
Ccdc9Q8VC31 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc9Q8VC31 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc9Q8VC31 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc9Q8VC31 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc9Q8VC31 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc9Q8VC31 Gm26596-201ENSMUST00000180464 2655 ntBASIC21.07■□□□□ 0.96
Ccdc9Q8VC31 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc9Q8VC31 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc9Q8VC31 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc9Q8VC31 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc9Q8VC31 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ccdc9Q8VC31 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Ccdc9Q8VC31 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc9Q8VC31 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.07■□□□□ 0.96
Ccdc9Q8VC31 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.07■□□□□ 0.96
Ccdc9Q8VC31 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.07■□□□□ 0.96
Ccdc9Q8VC31 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.07■□□□□ 0.96
Ccdc9Q8VC31 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc9Q8VC31 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc9Q8VC31 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC21.07■□□□□ 0.96
Ccdc9Q8VC31 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ccdc9Q8VC31 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc9Q8VC31 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc9Q8VC31 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc9Q8VC31 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc9Q8VC31 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc9Q8VC31 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc9Q8VC31 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc9Q8VC31 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms