Protein–RNA interactions for Protein: P97357

Taf1a, TATA box-binding protein-associated factor RNA polymerase I subunit A, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1aP97357 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Taf1aP97357 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.21■□□□□ 0.19
Taf1aP97357 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Taf1aP97357 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Taf1aP97357 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Taf1aP97357 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Taf1aP97357 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Taf1aP97357 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Taf1aP97357 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Taf1aP97357 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Taf1aP97357 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Taf1aP97357 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Taf1aP97357 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Taf1aP97357 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Taf1aP97357 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
Taf1aP97357 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Taf1aP97357 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Taf1aP97357 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Taf1aP97357 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Taf1aP97357 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.2■□□□□ 0.18
Taf1aP97357 Gm29257-201ENSMUST00000186115 639 ntBASIC16.2■□□□□ 0.18
Taf1aP97357 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Taf1aP97357 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.2■□□□□ 0.18
Taf1aP97357 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.2■□□□□ 0.18
Taf1aP97357 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Taf1aP97357 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Taf1aP97357 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Taf1aP97357 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Taf1aP97357 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Taf1aP97357 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Taf1aP97357 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Taf1aP97357 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Taf1aP97357 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Taf1aP97357 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Taf1aP97357 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Taf1aP97357 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Taf1aP97357 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.2■□□□□ 0.18
Taf1aP97357 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Taf1aP97357 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Taf1aP97357 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Taf1aP97357 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Taf1aP97357 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Taf1aP97357 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Taf1aP97357 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Taf1aP97357 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Taf1aP97357 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Taf1aP97357 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Taf1aP97357 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Taf1aP97357 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Taf1aP97357 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Taf1aP97357 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Taf1aP97357 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.19■□□□□ 0.18
Taf1aP97357 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.19■□□□□ 0.18
Taf1aP97357 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.19■□□□□ 0.18
Taf1aP97357 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Taf1aP97357 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.19■□□□□ 0.18
Taf1aP97357 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Taf1aP97357 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Taf1aP97357 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Taf1aP97357 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Taf1aP97357 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Taf1aP97357 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Taf1aP97357 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Taf1aP97357 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Taf1aP97357 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Taf1aP97357 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Taf1aP97357 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Taf1aP97357 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Taf1aP97357 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Taf1aP97357 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Taf1aP97357 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Taf1aP97357 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.18■□□□□ 0.18
Taf1aP97357 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Taf1aP97357 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Taf1aP97357 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Taf1aP97357 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Taf1aP97357 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Taf1aP97357 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Taf1aP97357 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.18■□□□□ 0.18
Taf1aP97357 Gm10033-202ENSMUST00000211874 928 ntBASIC16.18■□□□□ 0.18
Taf1aP97357 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Taf1aP97357 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Taf1aP97357 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Taf1aP97357 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Taf1aP97357 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Taf1aP97357 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Taf1aP97357 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Taf1aP97357 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Taf1aP97357 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Taf1aP97357 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.18■□□□□ 0.18
Taf1aP97357 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Taf1aP97357 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Taf1aP97357 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Taf1aP97357 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Taf1aP97357 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Taf1aP97357 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.17■□□□□ 0.18
Taf1aP97357 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Taf1aP97357 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Taf1aP97357 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.17■□□□□ 0.18
Taf1aP97357 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms