Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H3F3AP84243 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.09■□□□□ 0.49
H3F3AP84243 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.09■□□□□ 0.49
H3F3AP84243 C2orf69P4-201ENST00000565394 541 ntBASIC18.09■□□□□ 0.49
H3F3AP84243 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.09■□□□□ 0.49
H3F3AP84243 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
H3F3AP84243 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
H3F3AP84243 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H3F3AP84243 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
H3F3AP84243 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.09■□□□□ 0.49
H3F3AP84243 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
H3F3AP84243 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.09■□□□□ 0.49
H3F3AP84243 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
H3F3AP84243 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.09■□□□□ 0.49
H3F3AP84243 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.09■□□□□ 0.49
H3F3AP84243 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.09■□□□□ 0.49
H3F3AP84243 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.09■□□□□ 0.49
H3F3AP84243 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.09■□□□□ 0.49
H3F3AP84243 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
H3F3AP84243 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.08■□□□□ 0.49
H3F3AP84243 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
H3F3AP84243 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
H3F3AP84243 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
H3F3AP84243 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
H3F3AP84243 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
H3F3AP84243 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
H3F3AP84243 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.08■□□□□ 0.48
H3F3AP84243 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.08■□□□□ 0.48
H3F3AP84243 AC091874.3-201ENST00000512672 1195 ntBASIC18.08■□□□□ 0.48
H3F3AP84243 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.08■□□□□ 0.48
H3F3AP84243 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.08■□□□□ 0.48
H3F3AP84243 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
H3F3AP84243 MYC-209ENST00000641252 345 ntBASIC18.08■□□□□ 0.48
H3F3AP84243 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.08■□□□□ 0.48
H3F3AP84243 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
H3F3AP84243 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
H3F3AP84243 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
H3F3AP84243 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
H3F3AP84243 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
H3F3AP84243 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
H3F3AP84243 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.08■□□□□ 0.48
H3F3AP84243 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
H3F3AP84243 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H3F3AP84243 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H3F3AP84243 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.07■□□□□ 0.48
H3F3AP84243 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H3F3AP84243 DUSP5P2-201ENST00000426873 1033 ntBASIC18.07■□□□□ 0.48
H3F3AP84243 AC069152.1-201ENST00000438030 544 ntBASIC18.07■□□□□ 0.48
H3F3AP84243 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.07■□□□□ 0.48
H3F3AP84243 AC133041.1-202ENST00000642053 222 ntBASIC18.07■□□□□ 0.48
H3F3AP84243 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
H3F3AP84243 LINC01006-201ENST00000333319 2292 ntBASIC18.07■□□□□ 0.48
H3F3AP84243 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
H3F3AP84243 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.07■□□□□ 0.48
H3F3AP84243 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.07■□□□□ 0.48
H3F3AP84243 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.07■□□□□ 0.48
H3F3AP84243 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
H3F3AP84243 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
H3F3AP84243 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
H3F3AP84243 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H3F3AP84243 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
H3F3AP84243 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H3F3AP84243 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
H3F3AP84243 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
H3F3AP84243 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
H3F3AP84243 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.06■□□□□ 0.48
H3F3AP84243 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.06■□□□□ 0.48
H3F3AP84243 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.06■□□□□ 0.48
H3F3AP84243 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.06■□□□□ 0.48
H3F3AP84243 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
H3F3AP84243 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H3F3AP84243 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
H3F3AP84243 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
H3F3AP84243 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
H3F3AP84243 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
H3F3AP84243 AL162377.1-201ENST00000618844 1793 ntBASIC18.06■□□□□ 0.48
H3F3AP84243 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
H3F3AP84243 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
H3F3AP84243 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
H3F3AP84243 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.06■□□□□ 0.48
H3F3AP84243 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
H3F3AP84243 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.05■□□□□ 0.48
H3F3AP84243 AC092667.1-201ENST00000434301 2586 ntBASIC18.05■□□□□ 0.48
H3F3AP84243 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.05■□□□□ 0.48
H3F3AP84243 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H3F3AP84243 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H3F3AP84243 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H3F3AP84243 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.05■□□□□ 0.48
H3F3AP84243 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
H3F3AP84243 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
H3F3AP84243 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.05■□□□□ 0.48
H3F3AP84243 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.05■□□□□ 0.48
H3F3AP84243 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
H3F3AP84243 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.05■□□□□ 0.48
H3F3AP84243 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.05■□□□□ 0.48
H3F3AP84243 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.05■□□□□ 0.48
H3F3AP84243 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.05■□□□□ 0.48
H3F3AP84243 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.05■□□□□ 0.48
H3F3AP84243 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
H3F3AP84243 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms