Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM11AP58511 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.6■□□□□ 0.57
SMIM11AP58511 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM11AP58511 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM11AP58511 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM11AP58511 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM11AP58511 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM11AP58511 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM11AP58511 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM11AP58511 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM11AP58511 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SMIM11AP58511 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM11AP58511 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM11AP58511 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.6■□□□□ 0.57
SMIM11AP58511 AC007322.3-201ENST00000426526 701 ntBASIC18.6■□□□□ 0.57
SMIM11AP58511 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.6■□□□□ 0.57
SMIM11AP58511 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM11AP58511 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.6■□□□□ 0.57
SMIM11AP58511 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.6■□□□□ 0.57
SMIM11AP58511 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM11AP58511 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.6■□□□□ 0.57
SMIM11AP58511 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
SMIM11AP58511 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.6■□□□□ 0.57
SMIM11AP58511 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM11AP58511 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM11AP58511 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM11AP58511 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM11AP58511 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM11AP58511 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMIM11AP58511 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SMIM11AP58511 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM11AP58511 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM11AP58511 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SMIM11AP58511 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SMIM11AP58511 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM11AP58511 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SMIM11AP58511 LINC02228-203ENST00000641970 1355 ntBASIC18.59■□□□□ 0.57
SMIM11AP58511 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.59■□□□□ 0.57
SMIM11AP58511 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.59■□□□□ 0.57
SMIM11AP58511 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM11AP58511 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM11AP58511 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM11AP58511 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.59■□□□□ 0.57
SMIM11AP58511 AC027612.3-201ENST00000413684 1047 ntBASIC18.59■□□□□ 0.57
SMIM11AP58511 SLC7A5P2-201ENST00000553010 536 ntBASIC18.59■□□□□ 0.57
SMIM11AP58511 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM11AP58511 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM11AP58511 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM11AP58511 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM11AP58511 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SMIM11AP58511 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM11AP58511 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM11AP58511 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM11AP58511 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
SMIM11AP58511 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMIM11AP58511 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMIM11AP58511 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMIM11AP58511 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
SMIM11AP58511 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.58■□□□□ 0.57
SMIM11AP58511 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMIM11AP58511 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
SMIM11AP58511 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SMIM11AP58511 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMIM11AP58511 DPP3P2-201ENST00000416030 1696 ntBASIC18.58■□□□□ 0.57
SMIM11AP58511 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMIM11AP58511 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.58■□□□□ 0.56
SMIM11AP58511 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMIM11AP58511 AC105265.2-201ENST00000467189 838 ntBASIC18.58■□□□□ 0.56
SMIM11AP58511 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.58■□□□□ 0.56
SMIM11AP58511 AC104187.1-201ENST00000607510 612 ntBASIC18.58■□□□□ 0.56
SMIM11AP58511 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMIM11AP58511 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMIM11AP58511 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMIM11AP58511 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMIM11AP58511 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.58■□□□□ 0.56
SMIM11AP58511 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMIM11AP58511 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SMIM11AP58511 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.58■□□□□ 0.56
SMIM11AP58511 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMIM11AP58511 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMIM11AP58511 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMIM11AP58511 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.58■□□□□ 0.56
SMIM11AP58511 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.58■□□□□ 0.56
SMIM11AP58511 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMIM11AP58511 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.57■□□□□ 0.56
SMIM11AP58511 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMIM11AP58511 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMIM11AP58511 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.57■□□□□ 0.56
SMIM11AP58511 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMIM11AP58511 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMIM11AP58511 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.57■□□□□ 0.56
SMIM11AP58511 AC142381.2-201ENST00000566120 298 ntBASIC18.57■□□□□ 0.56
SMIM11AP58511 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.57■□□□□ 0.56
SMIM11AP58511 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMIM11AP58511 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMIM11AP58511 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMIM11AP58511 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMIM11AP58511 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.57■□□□□ 0.56
SMIM11AP58511 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMIM11AP58511 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms