Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH4P55283 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH4P55283 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.69■□□□□ 0.9
CDH4P55283 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.69■□□□□ 0.9
CDH4P55283 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH4P55283 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH4P55283 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.69■□□□□ 0.9
CDH4P55283 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH4P55283 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH4P55283 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH4P55283 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH4P55283 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH4P55283 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDH4P55283 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH4P55283 AL390719.1-204ENST00000412397 1219 ntBASIC20.69■□□□□ 0.9
CDH4P55283 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CDH4P55283 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDH4P55283 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH4P55283 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.69■□□□□ 0.9
CDH4P55283 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.69■□□□□ 0.9
CDH4P55283 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH4P55283 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH4P55283 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CDH4P55283 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH4P55283 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH4P55283 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
CDH4P55283 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH4P55283 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH4P55283 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH4P55283 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH4P55283 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.69■□□□□ 0.9
CDH4P55283 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH4P55283 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.68■□□□□ 0.9
CDH4P55283 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH4P55283 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH4P55283 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.68■□□□□ 0.9
CDH4P55283 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH4P55283 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.68■□□□□ 0.9
CDH4P55283 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.68■□□□□ 0.9
CDH4P55283 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.68■□□□□ 0.9
CDH4P55283 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
CDH4P55283 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH4P55283 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.68■□□□□ 0.9
CDH4P55283 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.68■□□□□ 0.9
CDH4P55283 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH4P55283 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
CDH4P55283 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH4P55283 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
CDH4P55283 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH4P55283 ABHD17AP1-201ENST00000358206 933 ntBASIC20.67■□□□□ 0.9
CDH4P55283 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CDH4P55283 ESRRAP1-201ENST00000400596 1257 ntBASIC20.67■□□□□ 0.9
CDH4P55283 POU5F1P3-201ENST00000428824 1078 ntBASIC20.67■□□□□ 0.9
CDH4P55283 AC026366.1-201ENST00000488803 879 ntBASIC20.67■□□□□ 0.9
CDH4P55283 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.67■□□□□ 0.9
CDH4P55283 UNC93B4-201ENST00000505679 747 ntBASIC20.67■□□□□ 0.9
CDH4P55283 AP003097.1-201ENST00000530657 1135 ntBASIC20.67■□□□□ 0.9
CDH4P55283 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH4P55283 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.67■□□□□ 0.9
CDH4P55283 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.67■□□□□ 0.9
CDH4P55283 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH4P55283 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CDH4P55283 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CDH4P55283 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH4P55283 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH4P55283 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.67■□□□□ 0.9
CDH4P55283 PTBP1P-201ENST00000554374 1601 ntBASIC20.67■□□□□ 0.9
CDH4P55283 DPP3P2-201ENST00000416030 1696 ntBASIC20.67■□□□□ 0.9
CDH4P55283 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH4P55283 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.67■□□□□ 0.9
CDH4P55283 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDH4P55283 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH4P55283 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH4P55283 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH4P55283 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH4P55283 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH4P55283 FAM201B-201ENST00000458407 597 ntBASIC20.66■□□□□ 0.9
CDH4P55283 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CDH4P55283 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH4P55283 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH4P55283 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.66■□□□□ 0.9
CDH4P55283 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.66■□□□□ 0.9
CDH4P55283 SOX15-203ENST00000570788 1093 ntBASIC20.66■□□□□ 0.9
CDH4P55283 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.66■□□□□ 0.9
CDH4P55283 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH4P55283 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH4P55283 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH4P55283 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDH4P55283 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH4P55283 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CDH4P55283 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.66■□□□□ 0.9
CDH4P55283 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH4P55283 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CDH4P55283 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH4P55283 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDH4P55283 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH4P55283 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.65■□□□□ 0.9
CDH4P55283 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH4P55283 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDH4P55283 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms