Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NR1H2P55055 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NR1H2P55055 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.09■□□□□ 0.65
NR1H2P55055 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NR1H2P55055 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NR1H2P55055 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.08■□□□□ 0.65
NR1H2P55055 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NR1H2P55055 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NR1H2P55055 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NR1H2P55055 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NR1H2P55055 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.08■□□□□ 0.65
NR1H2P55055 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
NR1H2P55055 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.65
NR1H2P55055 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.08■□□□□ 0.65
NR1H2P55055 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.08■□□□□ 0.64
NR1H2P55055 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NR1H2P55055 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.08■□□□□ 0.64
NR1H2P55055 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.08■□□□□ 0.64
NR1H2P55055 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NR1H2P55055 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NR1H2P55055 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
NR1H2P55055 AL137784.2-201ENST00000607332 1000 ntBASIC19.08■□□□□ 0.64
NR1H2P55055 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.08■□□□□ 0.64
NR1H2P55055 AL031602.1-201ENST00000633169 911 ntBASIC19.08■□□□□ 0.64
NR1H2P55055 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.08■□□□□ 0.64
NR1H2P55055 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NR1H2P55055 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
NR1H2P55055 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NR1H2P55055 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NR1H2P55055 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NR1H2P55055 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NR1H2P55055 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NR1H2P55055 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.08■□□□□ 0.64
NR1H2P55055 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NR1H2P55055 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
NR1H2P55055 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NR1H2P55055 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H2P55055 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H2P55055 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.07■□□□□ 0.64
NR1H2P55055 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
NR1H2P55055 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H2P55055 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.07■□□□□ 0.64
NR1H2P55055 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H2P55055 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.07■□□□□ 0.64
NR1H2P55055 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H2P55055 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
NR1H2P55055 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.07■□□□□ 0.64
NR1H2P55055 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.07■□□□□ 0.64
NR1H2P55055 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.07■□□□□ 0.64
NR1H2P55055 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.07■□□□□ 0.64
NR1H2P55055 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.07■□□□□ 0.64
NR1H2P55055 AC087239.1-201ENST00000622671 572 ntBASIC19.07■□□□□ 0.64
NR1H2P55055 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H2P55055 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H2P55055 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.07■□□□□ 0.64
NR1H2P55055 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NR1H2P55055 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NR1H2P55055 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NR1H2P55055 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NR1H2P55055 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.06■□□□□ 0.64
NR1H2P55055 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.06■□□□□ 0.64
NR1H2P55055 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.06■□□□□ 0.64
NR1H2P55055 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
NR1H2P55055 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.06■□□□□ 0.64
NR1H2P55055 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.06■□□□□ 0.64
NR1H2P55055 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.06■□□□□ 0.64
NR1H2P55055 AC090192.1-201ENST00000517740 490 ntBASIC19.06■□□□□ 0.64
NR1H2P55055 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NR1H2P55055 AC079089.2-201ENST00000531211 1277 ntBASIC19.06■□□□□ 0.64
NR1H2P55055 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.06■□□□□ 0.64
NR1H2P55055 CCDC92B-201ENST00000575506 885 ntBASIC19.06■□□□□ 0.64
NR1H2P55055 AC022517.1-201ENST00000592429 346 ntBASIC19.06■□□□□ 0.64
NR1H2P55055 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.06■□□□□ 0.64
NR1H2P55055 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.06■□□□□ 0.64
NR1H2P55055 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.06■□□□□ 0.64
NR1H2P55055 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NR1H2P55055 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NR1H2P55055 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NR1H2P55055 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NR1H2P55055 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
NR1H2P55055 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NR1H2P55055 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NR1H2P55055 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NR1H2P55055 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NR1H2P55055 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NR1H2P55055 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NR1H2P55055 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NR1H2P55055 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NR1H2P55055 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NR1H2P55055 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NR1H2P55055 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NR1H2P55055 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.05■□□□□ 0.64
NR1H2P55055 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.05■□□□□ 0.64
NR1H2P55055 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.05■□□□□ 0.64
NR1H2P55055 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
NR1H2P55055 TCF3P1-201ENST00000423021 1937 ntBASIC19.05■□□□□ 0.64
NR1H2P55055 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.05■□□□□ 0.64
NR1H2P55055 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
NR1H2P55055 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NR1H2P55055 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms