Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDAC3O15379 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.65■□□□□ 0.74
HDAC3O15379 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC3O15379 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC3O15379 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC3O15379 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC3O15379 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.65■□□□□ 0.74
HDAC3O15379 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.65■□□□□ 0.74
HDAC3O15379 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC3O15379 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC3O15379 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.65■□□□□ 0.74
HDAC3O15379 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC3O15379 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC3O15379 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC3O15379 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC3O15379 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HDAC3O15379 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HDAC3O15379 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.65■□□□□ 0.74
HDAC3O15379 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.65■□□□□ 0.74
HDAC3O15379 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.65■□□□□ 0.74
HDAC3O15379 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDAC3O15379 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
HDAC3O15379 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HDAC3O15379 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HDAC3O15379 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC3O15379 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC3O15379 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC3O15379 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.64■□□□□ 0.73
HDAC3O15379 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.64■□□□□ 0.73
HDAC3O15379 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC3O15379 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC3O15379 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
HDAC3O15379 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HDAC3O15379 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC3O15379 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC3O15379 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.64■□□□□ 0.73
HDAC3O15379 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC3O15379 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.64■□□□□ 0.73
HDAC3O15379 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HDAC3O15379 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC3O15379 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC3O15379 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC3O15379 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HDAC3O15379 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HDAC3O15379 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.63■□□□□ 0.73
HDAC3O15379 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC3O15379 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC3O15379 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC3O15379 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HDAC3O15379 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC3O15379 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HDAC3O15379 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC3O15379 AC005332.7-201ENST00000614046 2005 ntBASIC19.63■□□□□ 0.73
HDAC3O15379 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.63■□□□□ 0.73
HDAC3O15379 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HDAC3O15379 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC3O15379 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC3O15379 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
HDAC3O15379 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HDAC3O15379 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
HDAC3O15379 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HDAC3O15379 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HDAC3O15379 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HDAC3O15379 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HDAC3O15379 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
HDAC3O15379 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HDAC3O15379 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HDAC3O15379 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HDAC3O15379 AP000974.1-201ENST00000623909 2387 ntBASIC19.62■□□□□ 0.73
HDAC3O15379 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.62■□□□□ 0.73
HDAC3O15379 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HDAC3O15379 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HDAC3O15379 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.62■□□□□ 0.73
HDAC3O15379 SLC7A5P2-201ENST00000553010 536 ntBASIC19.62■□□□□ 0.73
HDAC3O15379 DUX4L2-201ENST00000561772 1275 ntBASIC19.62■□□□□ 0.73
HDAC3O15379 AL031432.3-201ENST00000607698 485 ntBASIC19.62■□□□□ 0.73
HDAC3O15379 AC131212.1-201ENST00000613771 668 ntBASIC19.62■□□□□ 0.73
HDAC3O15379 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
HDAC3O15379 DUX4L6-201ENST00000626483 1275 ntBASIC19.62■□□□□ 0.73
HDAC3O15379 DUX4L1-201ENST00000627662 1275 ntBASIC19.62■□□□□ 0.73
HDAC3O15379 DUX4L8-201ENST00000629013 1275 ntBASIC19.62■□□□□ 0.73
HDAC3O15379 DUX4L3-201ENST00000630187 1275 ntBASIC19.62■□□□□ 0.73
HDAC3O15379 DUX4L7-201ENST00000630678 1275 ntBASIC19.62■□□□□ 0.73
HDAC3O15379 DUX4L5-201ENST00000630834 1275 ntBASIC19.62■□□□□ 0.73
HDAC3O15379 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
HDAC3O15379 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HDAC3O15379 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.62■□□□□ 0.73
HDAC3O15379 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HDAC3O15379 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HDAC3O15379 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HDAC3O15379 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC3O15379 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.61■□□□□ 0.73
HDAC3O15379 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HDAC3O15379 AC008406.3-201ENST00000620001 1374 ntBASIC19.61■□□□□ 0.73
HDAC3O15379 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC3O15379 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC3O15379 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDAC3O15379 IRS3P-201ENST00000223076 1006 ntBASIC19.61■□□□□ 0.73
HDAC3O15379 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.61■□□□□ 0.73
HDAC3O15379 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms