Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC053393A0A0B4J1F6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BC053393A0A0B4J1F6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC053393A0A0B4J1F6 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
BC053393A0A0B4J1F6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC053393A0A0B4J1F6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC053393A0A0B4J1F6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.06□□□□□ -0.16
BC053393A0A0B4J1F6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC053393A0A0B4J1F6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC053393A0A0B4J1F6 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC053393A0A0B4J1F6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 Gm10033-202ENSMUST00000211874 928 ntBASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.05□□□□□ -0.16
BC053393A0A0B4J1F6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BC053393A0A0B4J1F6 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BC053393A0A0B4J1F6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BC053393A0A0B4J1F6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BC053393A0A0B4J1F6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.04□□□□□ -0.16
BC053393A0A0B4J1F6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BC053393A0A0B4J1F6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BC053393A0A0B4J1F6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BC053393A0A0B4J1F6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
BC053393A0A0B4J1F6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BC053393A0A0B4J1F6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BC053393A0A0B4J1F6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BC053393A0A0B4J1F6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.04□□□□□ -0.16
BC053393A0A0B4J1F6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BC053393A0A0B4J1F6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BC053393A0A0B4J1F6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.04□□□□□ -0.16
BC053393A0A0B4J1F6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.04□□□□□ -0.16
BC053393A0A0B4J1F6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.04□□□□□ -0.16
BC053393A0A0B4J1F6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BC053393A0A0B4J1F6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.04□□□□□ -0.16
BC053393A0A0B4J1F6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC053393A0A0B4J1F6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BC053393A0A0B4J1F6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC053393A0A0B4J1F6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC053393A0A0B4J1F6 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC053393A0A0B4J1F6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC053393A0A0B4J1F6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC053393A0A0B4J1F6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
BC053393A0A0B4J1F6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
BC053393A0A0B4J1F6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.03□□□□□ -0.16
BC053393A0A0B4J1F6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC053393A0A0B4J1F6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC053393A0A0B4J1F6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BC053393A0A0B4J1F6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC053393A0A0B4J1F6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC053393A0A0B4J1F6 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BC053393A0A0B4J1F6 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC053393A0A0B4J1F6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC053393A0A0B4J1F6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC053393A0A0B4J1F6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC053393A0A0B4J1F6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BC053393A0A0B4J1F6 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
BC053393A0A0B4J1F6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.02□□□□□ -0.16
BC053393A0A0B4J1F6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
BC053393A0A0B4J1F6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
BC053393A0A0B4J1F6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BC053393A0A0B4J1F6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
BC053393A0A0B4J1F6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BC053393A0A0B4J1F6 Idnk-204ENSMUST00000226010 1898 ntBASIC14.02□□□□□ -0.16
BC053393A0A0B4J1F6 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.02□□□□□ -0.16
BC053393A0A0B4J1F6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.02□□□□□ -0.16
BC053393A0A0B4J1F6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BC053393A0A0B4J1F6 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BC053393A0A0B4J1F6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BC053393A0A0B4J1F6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BC053393A0A0B4J1F6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BC053393A0A0B4J1F6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BC053393A0A0B4J1F6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BC053393A0A0B4J1F6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BC053393A0A0B4J1F6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
BC053393A0A0B4J1F6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.02□□□□□ -0.17
BC053393A0A0B4J1F6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BC053393A0A0B4J1F6 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BC053393A0A0B4J1F6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BC053393A0A0B4J1F6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BC053393A0A0B4J1F6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BC053393A0A0B4J1F6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms