Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
SNX18Q96RF0 AC008817.1-201ENST00000504215 1562 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
SNX18Q96RF0 TFF1-201ENST00000291527 551 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SNX18Q96RF0 OR4L1-201ENST00000315683 939 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 PAGE5-202ENST00000374952 428 ntTSL 5 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 AC009319.1-201ENST00000411493 754 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 RPL7P13-201ENST00000415103 741 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 AC003986.3-201ENST00000417460 692 ntTSL 3 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 LINC01468-202ENST00000435813 975 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SNX18Q96RF0 AP001171.1-201ENST00000436373 864 ntTSL 2 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 MTND6P15-201ENST00000441157 521 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 OR7E109P-201ENST00000445529 855 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 AC073254.1-202ENST00000447488 640 ntTSL 3 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 MTND4LP12-201ENST00000448237 295 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 OSBPL10-AS1-207ENST00000455961 411 ntTSL 2 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 RN7SL757P-201ENST00000466709 301 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 RN7SL401P-201ENST00000470065 298 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 RPL12P5-201ENST00000475149 392 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 RPL12P8-201ENST00000482081 580 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 RPL5P29-201ENST00000482972 894 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 RPL19P13-201ENST00000483119 583 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 RPS10P16-201ENST00000483812 496 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 TRIM60P15-201ENST00000509929 712 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 AL158819.1-201ENST00000514681 398 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 AC144568.2-201ENST00000522481 944 ntTSL 5 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 AP003041.2-201ENST00000525666 1180 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 AP000916.2-201ENST00000528904 286 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 AC013652.1-206ENST00000558277 789 ntTSL 2 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 AC036108.1-201ENST00000559468 588 ntTSL 4 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 AC012186.1-201ENST00000566702 398 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 AC020779.2-201ENST00000568984 393 ntTSL 3 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 AC008759.2-201ENST00000585880 600 ntTSL 5 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 AC067796.1-201ENST00000586795 496 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 AC083964.1-201ENST00000607549 630 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 TTR-204ENST00000610404 1040 ntTSL 5 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 TTR-205ENST00000613781 556 ntTSL 5 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 AC005691.1-201ENST00000624723 401 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 AC007326.3-201ENST00000636418 176 ntBASIC7.6□□□□□ -1.19
SNX18Q96RF0 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SNX18Q96RF0 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SNX18Q96RF0 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SNX18Q96RF0 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SNX18Q96RF0 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SNX18Q96RF0 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SNX18Q96RF0 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SNX18Q96RF0 RNF214-204ENST00000530849 2846 ntTSL 5 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 PAQR5-205ENST00000561153 2347 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
SNX18Q96RF0 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.59□□□□□ -1.19
SNX18Q96RF0 SLC17A2-202ENST00000360488 2270 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNX18Q96RF0 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNX18Q96RF0 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNX18Q96RF0 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SNX18Q96RF0 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNX18Q96RF0 AIG1-201ENST00000275235 1202 ntTSL 2 BASIC7.59□□□□□ -1.19
SNX18Q96RF0 C4orf22-201ENST00000358105 895 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNX18Q96RF0 KRBOX1-201ENST00000383748 674 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNX18Q96RF0 IGLV6-57-201ENST00000390285 353 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
SNX18Q96RF0 RPL7L1P12-201ENST00000417594 729 ntBASIC7.59□□□□□ -1.19
SNX18Q96RF0 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC7.59□□□□□ -1.19
SNX18Q96RF0 SNAI1P1-201ENST00000428587 777 ntBASIC7.59□□□□□ -1.19
SNX18Q96RF0 FTH1P10-202ENST00000430907 550 ntBASIC7.59□□□□□ -1.19
SNX18Q96RF0 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SNX18Q96RF0 RPL22P11-201ENST00000434894 385 ntBASIC7.59□□□□□ -1.19
SNX18Q96RF0 LINC01508-202ENST00000436671 755 ntTSL 3 BASIC7.59□□□□□ -1.19
SNX18Q96RF0 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC7.59□□□□□ -1.19
SNX18Q96RF0 AL391825.1-202ENST00000458136 741 ntBASIC7.59□□□□□ -1.19
SNX18Q96RF0 RPS8P10-201ENST00000460876 622 ntBASIC7.59□□□□□ -1.19
SNX18Q96RF0 PSMD6-AS1-201ENST00000462717 441 ntTSL 3 BASIC7.59□□□□□ -1.19
SNX18Q96RF0 AC055758.2-202ENST00000482351 624 ntTSL 2 BASIC7.59□□□□□ -1.19
SNX18Q96RF0 RN7SL215P-201ENST00000487718 298 ntBASIC7.59□□□□□ -1.19
SNX18Q96RF0 TXK-203ENST00000507351 1153 ntTSL 2 BASIC7.59□□□□□ -1.19
SNX18Q96RF0 RNA5SP287-201ENST00000516358 103 ntBASIC7.59□□□□□ -1.19
SNX18Q96RF0 RNU6-751P-201ENST00000516382 101 ntBASIC7.59□□□□□ -1.19
SNX18Q96RF0 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC7.59□□□□□ -1.19
SNX18Q96RF0 PCED1B-AS1-204ENST00000547851 780 ntTSL 3 BASIC7.59□□□□□ -1.19
SNX18Q96RF0 NUDT4-205ENST00000548662 765 ntTSL 3 BASIC7.59□□□□□ -1.19
SNX18Q96RF0 AC005632.1-201ENST00000550637 576 ntBASIC7.59□□□□□ -1.19
SNX18Q96RF0 AC010536.2-201ENST00000563036 338 ntTSL 3 BASIC7.59□□□□□ -1.19
SNX18Q96RF0 AC010650.1-201ENST00000567559 494 ntBASIC7.59□□□□□ -1.19
SNX18Q96RF0 AC093249.5-201ENST00000568120 430 ntBASIC7.59□□□□□ -1.19
SNX18Q96RF0 AC090774.3-201ENST00000578666 742 ntBASIC7.59□□□□□ -1.19
SNX18Q96RF0 AP001178.2-201ENST00000580007 326 ntTSL 3 BASIC7.59□□□□□ -1.19
SNX18Q96RF0 AC243960.5-201ENST00000597858 255 ntBASIC7.59□□□□□ -1.19
SNX18Q96RF0 AC174071.1-201ENST00000603069 517 ntBASIC7.59□□□□□ -1.19
SNX18Q96RF0 AC010722.1-202ENST00000618284 573 ntTSL 4 BASIC7.59□□□□□ -1.19
SNX18Q96RF0 CU639417.5-201ENST00000623983 476 ntTSL 3 BASIC7.59□□□□□ -1.19
SNX18Q96RF0 AC135068.6-201ENST00000625294 622 ntBASIC7.59□□□□□ -1.19
SNX18Q96RF0 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC7.59□□□□□ -1.19
SNX18Q96RF0 AL133464.1-204ENST00000634280 1094 ntTSL 5 BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms