Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.97■□□□□ 0.31
CCL13Q99616 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.97■□□□□ 0.31
CCL13Q99616 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCL13Q99616 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.97■□□□□ 0.31
CCL13Q99616 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.97■□□□□ 0.31
CCL13Q99616 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCL13Q99616 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
CCL13Q99616 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CCL13Q99616 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCL13Q99616 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCL13Q99616 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCL13Q99616 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCL13Q99616 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCL13Q99616 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.97■□□□□ 0.31
CCL13Q99616 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL13Q99616 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL13Q99616 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCL13Q99616 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.96■□□□□ 0.31
CCL13Q99616 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL13Q99616 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL13Q99616 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL13Q99616 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCL13Q99616 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCL13Q99616 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCL13Q99616 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL13Q99616 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL13Q99616 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL13Q99616 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL13Q99616 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CCL13Q99616 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.96■□□□□ 0.31
CCL13Q99616 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.96■□□□□ 0.31
CCL13Q99616 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.96■□□□□ 0.31
CCL13Q99616 MIR4758-201ENST00000577688 71 ntBASIC16.96■□□□□ 0.31
CCL13Q99616 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCL13Q99616 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL13Q99616 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL13Q99616 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL13Q99616 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCL13Q99616 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.96■□□□□ 0.31
CCL13Q99616 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL13Q99616 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCL13Q99616 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CCL13Q99616 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCL13Q99616 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCL13Q99616 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
CCL13Q99616 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCL13Q99616 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCL13Q99616 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CCL13Q99616 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL13Q99616 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL13Q99616 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCL13Q99616 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.95■□□□□ 0.3
CCL13Q99616 AC098934.4-201ENST00000564127 592 ntBASIC16.95■□□□□ 0.3
CCL13Q99616 AC092118.2-201ENST00000613495 667 ntBASIC16.95■□□□□ 0.3
CCL13Q99616 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCL13Q99616 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCL13Q99616 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.95■□□□□ 0.3
CCL13Q99616 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.95■□□□□ 0.3
CCL13Q99616 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL13Q99616 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL13Q99616 AC092720.2-201ENST00000602388 1665 ntBASIC16.94■□□□□ 0.3
CCL13Q99616 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCL13Q99616 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CCL13Q99616 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.94■□□□□ 0.3
CCL13Q99616 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
CCL13Q99616 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL13Q99616 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCL13Q99616 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.94■□□□□ 0.3
CCL13Q99616 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.94■□□□□ 0.3
CCL13Q99616 DUSP5P2-201ENST00000426873 1033 ntBASIC16.94■□□□□ 0.3
CCL13Q99616 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.94■□□□□ 0.3
CCL13Q99616 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CCL13Q99616 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CCL13Q99616 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.94■□□□□ 0.3
CCL13Q99616 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.94■□□□□ 0.3
CCL13Q99616 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCL13Q99616 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.94■□□□□ 0.3
CCL13Q99616 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCL13Q99616 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL13Q99616 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL13Q99616 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL13Q99616 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCL13Q99616 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL13Q99616 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL13Q99616 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL13Q99616 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.93■□□□□ 0.3
CCL13Q99616 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL13Q99616 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
CCL13Q99616 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL13Q99616 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CCL13Q99616 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL13Q99616 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CCL13Q99616 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.93■□□□□ 0.3
CCL13Q99616 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.93■□□□□ 0.3
CCL13Q99616 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.93■□□□□ 0.3
CCL13Q99616 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.93■□□□□ 0.3
CCL13Q99616 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.93■□□□□ 0.3
CCL13Q99616 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CCL13Q99616 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL13Q99616 AIRN-201ENST00000601203 4374 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms