Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GAFA1Q96PS6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GAFA1Q96PS6 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.88■□□□□ 0.29
GAFA1Q96PS6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.88■□□□□ 0.29
GAFA1Q96PS6 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.88■□□□□ 0.29
GAFA1Q96PS6 AC098934.4-201ENST00000564127 592 ntBASIC16.88■□□□□ 0.29
GAFA1Q96PS6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.88■□□□□ 0.29
GAFA1Q96PS6 MIR4758-201ENST00000577688 71 ntBASIC16.88■□□□□ 0.29
GAFA1Q96PS6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.88■□□□□ 0.29
GAFA1Q96PS6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.88■□□□□ 0.29
GAFA1Q96PS6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.88■□□□□ 0.29
GAFA1Q96PS6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.88■□□□□ 0.29
GAFA1Q96PS6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GAFA1Q96PS6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GAFA1Q96PS6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
GAFA1Q96PS6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GAFA1Q96PS6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GAFA1Q96PS6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GAFA1Q96PS6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
GAFA1Q96PS6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
GAFA1Q96PS6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GAFA1Q96PS6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GAFA1Q96PS6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GAFA1Q96PS6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.87■□□□□ 0.29
GAFA1Q96PS6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
GAFA1Q96PS6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
GAFA1Q96PS6 AL355802.2-201ENST00000402069 882 ntBASIC16.87■□□□□ 0.29
GAFA1Q96PS6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.87■□□□□ 0.29
GAFA1Q96PS6 DUSP5P2-201ENST00000426873 1033 ntBASIC16.87■□□□□ 0.29
GAFA1Q96PS6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.87■□□□□ 0.29
GAFA1Q96PS6 C2orf69P4-201ENST00000565394 541 ntBASIC16.87■□□□□ 0.29
GAFA1Q96PS6 AC142086.2-201ENST00000569753 217 ntBASIC16.87■□□□□ 0.29
GAFA1Q96PS6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.87■□□□□ 0.29
GAFA1Q96PS6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GAFA1Q96PS6 AC092667.1-201ENST00000434301 2586 ntBASIC16.87■□□□□ 0.29
GAFA1Q96PS6 LINC01006-201ENST00000333319 2292 ntBASIC16.87■□□□□ 0.29
GAFA1Q96PS6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.87■□□□□ 0.29
GAFA1Q96PS6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
GAFA1Q96PS6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.87■□□□□ 0.29
GAFA1Q96PS6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GAFA1Q96PS6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GAFA1Q96PS6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.87■□□□□ 0.29
GAFA1Q96PS6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.87■□□□□ 0.29
GAFA1Q96PS6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GAFA1Q96PS6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GAFA1Q96PS6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GAFA1Q96PS6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
GAFA1Q96PS6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GAFA1Q96PS6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GAFA1Q96PS6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GAFA1Q96PS6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.86■□□□□ 0.29
GAFA1Q96PS6 DPP3P2-201ENST00000416030 1696 ntBASIC16.86■□□□□ 0.29
GAFA1Q96PS6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.86■□□□□ 0.29
GAFA1Q96PS6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GAFA1Q96PS6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GAFA1Q96PS6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
GAFA1Q96PS6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
GAFA1Q96PS6 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.86■□□□□ 0.29
GAFA1Q96PS6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
GAFA1Q96PS6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
GAFA1Q96PS6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.86■□□□□ 0.29
GAFA1Q96PS6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.86■□□□□ 0.29
GAFA1Q96PS6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GAFA1Q96PS6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.86■□□□□ 0.29
GAFA1Q96PS6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.86■□□□□ 0.29
GAFA1Q96PS6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.86■□□□□ 0.29
GAFA1Q96PS6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.86■□□□□ 0.29
GAFA1Q96PS6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
GAFA1Q96PS6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GAFA1Q96PS6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
GAFA1Q96PS6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
GAFA1Q96PS6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
GAFA1Q96PS6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
GAFA1Q96PS6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GAFA1Q96PS6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.85■□□□□ 0.29
GAFA1Q96PS6 AC091874.3-201ENST00000512672 1195 ntBASIC16.85■□□□□ 0.29
GAFA1Q96PS6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.85■□□□□ 0.29
GAFA1Q96PS6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GAFA1Q96PS6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GAFA1Q96PS6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.85■□□□□ 0.29
GAFA1Q96PS6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.85■□□□□ 0.29
GAFA1Q96PS6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GAFA1Q96PS6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
GAFA1Q96PS6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
GAFA1Q96PS6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GAFA1Q96PS6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.84■□□□□ 0.29
GAFA1Q96PS6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GAFA1Q96PS6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GAFA1Q96PS6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GAFA1Q96PS6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GAFA1Q96PS6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.84■□□□□ 0.29
GAFA1Q96PS6 AC069152.1-201ENST00000438030 544 ntBASIC16.84■□□□□ 0.29
GAFA1Q96PS6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GAFA1Q96PS6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.84■□□□□ 0.29
GAFA1Q96PS6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.84■□□□□ 0.29
GAFA1Q96PS6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.84■□□□□ 0.29
GAFA1Q96PS6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GAFA1Q96PS6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.84■□□□□ 0.29
GAFA1Q96PS6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GAFA1Q96PS6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms