Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smco3Q8BQM7 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smco3Q8BQM7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smco3Q8BQM7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Smco3Q8BQM7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smco3Q8BQM7 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smco3Q8BQM7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smco3Q8BQM7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smco3Q8BQM7 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.53□□□□□ -0.08
Smco3Q8BQM7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smco3Q8BQM7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smco3Q8BQM7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smco3Q8BQM7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Smco3Q8BQM7 Gm12251-201ENSMUST00000117893 792 ntBASIC14.53□□□□□ -0.08
Smco3Q8BQM7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smco3Q8BQM7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smco3Q8BQM7 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smco3Q8BQM7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smco3Q8BQM7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smco3Q8BQM7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smco3Q8BQM7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Smco3Q8BQM7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.52□□□□□ -0.08
Smco3Q8BQM7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smco3Q8BQM7 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smco3Q8BQM7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Smco3Q8BQM7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smco3Q8BQM7 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smco3Q8BQM7 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smco3Q8BQM7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Smco3Q8BQM7 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.52□□□□□ -0.08
Smco3Q8BQM7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smco3Q8BQM7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Smco3Q8BQM7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smco3Q8BQM7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smco3Q8BQM7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smco3Q8BQM7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smco3Q8BQM7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smco3Q8BQM7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smco3Q8BQM7 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.52□□□□□ -0.09
Smco3Q8BQM7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smco3Q8BQM7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smco3Q8BQM7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smco3Q8BQM7 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smco3Q8BQM7 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.52□□□□□ -0.09
Smco3Q8BQM7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smco3Q8BQM7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.52□□□□□ -0.09
Smco3Q8BQM7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smco3Q8BQM7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smco3Q8BQM7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smco3Q8BQM7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Smco3Q8BQM7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco3Q8BQM7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco3Q8BQM7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco3Q8BQM7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Smco3Q8BQM7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco3Q8BQM7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Smco3Q8BQM7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.51□□□□□ -0.09
Smco3Q8BQM7 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.51□□□□□ -0.09
Smco3Q8BQM7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.51□□□□□ -0.09
Smco3Q8BQM7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco3Q8BQM7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.51□□□□□ -0.09
Smco3Q8BQM7 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.51□□□□□ -0.09
Smco3Q8BQM7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smco3Q8BQM7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Smco3Q8BQM7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco3Q8BQM7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco3Q8BQM7 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Smco3Q8BQM7 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Smco3Q8BQM7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco3Q8BQM7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco3Q8BQM7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco3Q8BQM7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Smco3Q8BQM7 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Smco3Q8BQM7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smco3Q8BQM7 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smco3Q8BQM7 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Smco3Q8BQM7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smco3Q8BQM7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smco3Q8BQM7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smco3Q8BQM7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smco3Q8BQM7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smco3Q8BQM7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.5□□□□□ -0.09
Smco3Q8BQM7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smco3Q8BQM7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Smco3Q8BQM7 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.5□□□□□ -0.09
Smco3Q8BQM7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smco3Q8BQM7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Smco3Q8BQM7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Smco3Q8BQM7 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smco3Q8BQM7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smco3Q8BQM7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smco3Q8BQM7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smco3Q8BQM7 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smco3Q8BQM7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smco3Q8BQM7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Smco3Q8BQM7 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smco3Q8BQM7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Smco3Q8BQM7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Smco3Q8BQM7 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Smco3Q8BQM7 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms