Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.7■□□□□ 0.58
Trim6Q8BGE7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim6Q8BGE7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.69■□□□□ 0.58
Trim6Q8BGE7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim6Q8BGE7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trim6Q8BGE7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim6Q8BGE7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim6Q8BGE7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Trim6Q8BGE7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim6Q8BGE7 Gm42778-201ENSMUST00000199644 553 ntBASIC18.69■□□□□ 0.58
Trim6Q8BGE7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim6Q8BGE7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim6Q8BGE7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trim6Q8BGE7 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.69■□□□□ 0.58
Trim6Q8BGE7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim6Q8BGE7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim6Q8BGE7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim6Q8BGE7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim6Q8BGE7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim6Q8BGE7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim6Q8BGE7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim6Q8BGE7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim6Q8BGE7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim6Q8BGE7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim6Q8BGE7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim6Q8BGE7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim6Q8BGE7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim6Q8BGE7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim6Q8BGE7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trim6Q8BGE7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim6Q8BGE7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trim6Q8BGE7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim6Q8BGE7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim6Q8BGE7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim6Q8BGE7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim6Q8BGE7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim6Q8BGE7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.67■□□□□ 0.58
Trim6Q8BGE7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trim6Q8BGE7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
Trim6Q8BGE7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trim6Q8BGE7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim6Q8BGE7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim6Q8BGE7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim6Q8BGE7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim6Q8BGE7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim6Q8BGE7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim6Q8BGE7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim6Q8BGE7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim6Q8BGE7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim6Q8BGE7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim6Q8BGE7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim6Q8BGE7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim6Q8BGE7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trim6Q8BGE7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim6Q8BGE7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim6Q8BGE7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim6Q8BGE7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim6Q8BGE7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim6Q8BGE7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim6Q8BGE7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim6Q8BGE7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim6Q8BGE7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim6Q8BGE7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim6Q8BGE7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim6Q8BGE7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.66■□□□□ 0.58
Trim6Q8BGE7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim6Q8BGE7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim6Q8BGE7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim6Q8BGE7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim6Q8BGE7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim6Q8BGE7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim6Q8BGE7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim6Q8BGE7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim6Q8BGE7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim6Q8BGE7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim6Q8BGE7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim6Q8BGE7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trim6Q8BGE7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim6Q8BGE7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.65■□□□□ 0.58
Trim6Q8BGE7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trim6Q8BGE7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim6Q8BGE7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim6Q8BGE7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim6Q8BGE7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim6Q8BGE7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trim6Q8BGE7 Gm6420-201ENSMUST00000193885 723 ntBASIC18.64■□□□□ 0.57
Trim6Q8BGE7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim6Q8BGE7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim6Q8BGE7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trim6Q8BGE7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim6Q8BGE7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trim6Q8BGE7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim6Q8BGE7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trim6Q8BGE7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.64■□□□□ 0.57
Trim6Q8BGE7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim6Q8BGE7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim6Q8BGE7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim6Q8BGE7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim6Q8BGE7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim6Q8BGE7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms