Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Commd3Q63829 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Commd3Q63829 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Commd3Q63829 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.7□□□□□ -0.06
Commd3Q63829 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Commd3Q63829 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.7□□□□□ -0.06
Commd3Q63829 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.7□□□□□ -0.06
Commd3Q63829 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Commd3Q63829 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Commd3Q63829 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Commd3Q63829 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Commd3Q63829 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Commd3Q63829 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Commd3Q63829 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Commd3Q63829 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Commd3Q63829 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Commd3Q63829 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Commd3Q63829 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Commd3Q63829 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Commd3Q63829 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Commd3Q63829 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Commd3Q63829 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Commd3Q63829 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Commd3Q63829 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Commd3Q63829 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Commd3Q63829 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.69□□□□□ -0.06
Commd3Q63829 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Commd3Q63829 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Commd3Q63829 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Commd3Q63829 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.68□□□□□ -0.06
Commd3Q63829 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.68□□□□□ -0.06
Commd3Q63829 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Commd3Q63829 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.68□□□□□ -0.06
Commd3Q63829 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Commd3Q63829 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Commd3Q63829 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Commd3Q63829 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.68□□□□□ -0.06
Commd3Q63829 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.68□□□□□ -0.06
Commd3Q63829 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.68□□□□□ -0.06
Commd3Q63829 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Commd3Q63829 Gm5812-201ENSMUST00000061073 957 ntBASIC14.68□□□□□ -0.06
Commd3Q63829 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Commd3Q63829 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Commd3Q63829 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Commd3Q63829 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Commd3Q63829 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Commd3Q63829 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Commd3Q63829 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Commd3Q63829 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Commd3Q63829 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Commd3Q63829 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Commd3Q63829 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Commd3Q63829 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Commd3Q63829 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.68□□□□□ -0.06
Commd3Q63829 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Commd3Q63829 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Commd3Q63829 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Commd3Q63829 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Commd3Q63829 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Commd3Q63829 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Commd3Q63829 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Commd3Q63829 Gm11421-201ENSMUST00000122124 294 ntBASIC14.67□□□□□ -0.06
Commd3Q63829 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Commd3Q63829 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
Commd3Q63829 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Commd3Q63829 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Commd3Q63829 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Commd3Q63829 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.67□□□□□ -0.06
Commd3Q63829 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Commd3Q63829 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Commd3Q63829 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Commd3Q63829 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Commd3Q63829 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Commd3Q63829 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Commd3Q63829 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Commd3Q63829 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.66□□□□□ -0.06
Commd3Q63829 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Commd3Q63829 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms